Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.34■□□□□ 0.85
CDH17Q12864 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH17Q12864 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH17Q12864 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH17Q12864 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH17Q12864 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDH17Q12864 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDH17Q12864 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDH17Q12864 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.33■□□□□ 0.85
CDH17Q12864 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH17Q12864 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.33■□□□□ 0.85
CDH17Q12864 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.33■□□□□ 0.85
CDH17Q12864 AC005181.1-201ENST00000604782 1256 ntBASIC20.33■□□□□ 0.85
CDH17Q12864 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CDH17Q12864 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH17Q12864 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH17Q12864 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH17Q12864 AFG3L1P-217ENST00000557444 2447 ntBASIC20.33■□□□□ 0.84
CDH17Q12864 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDH17Q12864 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDH17Q12864 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 AL512625.2-201ENST00000417533 625 ntBASIC20.32■□□□□ 0.84
CDH17Q12864 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH17Q12864 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.32■□□□□ 0.84
CDH17Q12864 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH17Q12864 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 AC080038.1-201ENST00000611274 1154 ntBASIC20.32■□□□□ 0.84
CDH17Q12864 IKBKGP1-201ENST00000612193 1073 ntBASIC20.32■□□□□ 0.84
CDH17Q12864 AC010980.2-201ENST00000587099 1412 ntBASIC20.32■□□□□ 0.84
CDH17Q12864 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDH17Q12864 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
CDH17Q12864 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CDH17Q12864 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDH17Q12864 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH17Q12864 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH17Q12864 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH17Q12864 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH17Q12864 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.31■□□□□ 0.84
CDH17Q12864 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CDH17Q12864 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH17Q12864 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.31■□□□□ 0.84
CDH17Q12864 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDH17Q12864 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.31■□□□□ 0.84
CDH17Q12864 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDH17Q12864 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CDH17Q12864 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 AL355472.2-201ENST00000422958 438 ntBASIC20.3■□□□□ 0.84
CDH17Q12864 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 AC073111.5-205ENST00000641717 521 ntBASIC20.3■□□□□ 0.84
CDH17Q12864 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDH17Q12864 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDH17Q12864 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.3■□□□□ 0.84
CDH17Q12864 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH17Q12864 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH17Q12864 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH17Q12864 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDH17Q12864 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms