Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 VAR1Q0140 1197 nt1.52□□□□□ -2.17
RRI2Q12348 YHL041WYHL041W 450 nt1.52□□□□□ -2.17
RRI2Q12348 ZIP2YGL249W 2115 nt1.52□□□□□ -2.17
RRI2Q12348 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
RRI2Q12348 YER079WYER079W 633 nt1.51□□□□□ -2.17
RRI2Q12348 YMR141W-AYMR141W-A 225 nt1.51□□□□□ -2.17
RRI2Q12348 YMR242W-AYMR242W-A 90 nt1.51□□□□□ -2.17
RRI2Q12348 YNL058CYNL058C 951 nt1.51□□□□□ -2.17
RRI2Q12348 YOR053WYOR053W 342 nt1.51□□□□□ -2.17
RRI2Q12348 YOR108C-AYOR108C-A 210 nt1.51□□□□□ -2.17
RRI2Q12348 MPT5YGL178W 2580 nt1.51□□□□□ -2.17
RRI2Q12348 SPT21YMR179W 2277 nt1.5□□□□□ -2.17
RRI2Q12348 RRT15YLR162W-A 189 nt1.5□□□□□ -2.17
RRI2Q12348 PIP2YOR363C 2991 nt1.5□□□□□ -2.17
RRI2Q12348 snR51snR51 107 nt1.5□□□□□ -2.17
RRI2Q12348 SPC98YNL126W 2541 nt1.5□□□□□ -2.17
RRI2Q12348 NPC2YDL046W 522 nt1.49□□□□□ -2.17
RRI2Q12348 snR14snR14 160 nt1.49□□□□□ -2.17
RRI2Q12348 YPR063CYPR063C 423 nt1.49□□□□□ -2.17
RRI2Q12348 RSM22YKL155C 1887 nt1.49□□□□□ -2.17
RRI2Q12348 NUP188YML103C 4968 nt1.49□□□□□ -2.17
RRI2Q12348 TTI1YKL033W 3117 nt1.48□□□□□ -2.17
RRI2Q12348 SWI4YER111C 3282 nt1.48□□□□□ -2.17
RRI2Q12348 SEC3YER008C 4011 nt1.47□□□□□ -2.17
RRI2Q12348 YLL020CYLL020C 306 nt1.47□□□□□ -2.17
RRI2Q12348 BSC3YLR465C 309 nt1.47□□□□□ -2.17
RRI2Q12348 POL5YEL055C 3069 nt1.47□□□□□ -2.17
RRI2Q12348 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
RRI2Q12348 LAA1YJL207C 6045 nt1.46□□□□□ -2.18
RRI2Q12348 YLR154W-FYLR154W-F 141 nt1.46□□□□□ -2.18
RRI2Q12348 RRT1YBL048W 312 nt1.46□□□□□ -2.18
RRI2Q12348 LEE1YPL054W 906 nt1.46□□□□□ -2.18
RRI2Q12348 SLI15YBR156C 2097 nt1.46□□□□□ -2.18
RRI2Q12348 IML1YJR138W 4755 nt1.45□□□□□ -2.18
RRI2Q12348 YCS4YLR272C 3531 nt1.45□□□□□ -2.18
RRI2Q12348 YHR138CYHR138C 345 nt1.44□□□□□ -2.18
RRI2Q12348 tV(UAC)BtV(UAC)B 74 nt1.44□□□□□ -2.18
RRI2Q12348 tV(UAC)DtV(UAC)D 74 nt1.44□□□□□ -2.18
RRI2Q12348 INP2YMR163C 2118 nt1.44□□□□□ -2.18
RRI2Q12348 YMR290W-AYMR290W-A 348 nt1.44□□□□□ -2.18
RRI2Q12348 YOL160WYOL160W 342 nt1.44□□□□□ -2.18
RRI2Q12348 YOR199WYOR199W 330 nt1.44□□□□□ -2.18
RRI2Q12348 RPL33BYOR234C 324 nt1.44□□□□□ -2.18
RRI2Q12348 LCD1YDR499W 2244 nt1.44□□□□□ -2.18
RRI2Q12348 MAD1YGL086W 2250 nt1.43□□□□□ -2.18
RRI2Q12348 snR72snR72 98 nt1.43□□□□□ -2.18
RRI2Q12348 YDR169C-AYDR169C-A 150 nt1.43□□□□□ -2.18
RRI2Q12348 YJL135WYJL135W 318 nt1.43□□□□□ -2.18
RRI2Q12348 YPL261CYPL261C 309 nt1.43□□□□□ -2.18
RRI2Q12348 PET127YOR017W 2403 nt1.42□□□□□ -2.18
RRI2Q12348 YJR003CYJR003C 1560 nt1.42□□□□□ -2.18
RRI2Q12348 NUP145YGL092W 3954 nt1.42□□□□□ -2.18
RRI2Q12348 HUG1YML058W-A 207 nt1.42□□□□□ -2.18
RRI2Q12348 MMS4YBR098W 2076 nt1.42□□□□□ -2.18
RRI2Q12348 PAC1YOR269W 1485 nt1.42□□□□□ -2.18
RRI2Q12348 TRM732YMR259C 4263 nt1.41□□□□□ -2.18
RRI2Q12348 RAD9YDR217C 3930 nt1.41□□□□□ -2.18
RRI2Q12348 YBR012CYBR012C 420 nt1.41□□□□□ -2.18
RRI2Q12348 FIG4YNL325C 2640 nt1.41□□□□□ -2.18
RRI2Q12348 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
RRI2Q12348 STF2YGR008C 255 nt1.4□□□□□ -2.19
RRI2Q12348 YOR121CYOR121C 306 nt1.4□□□□□ -2.19
RRI2Q12348 APL3YBL037W 3078 nt1.4□□□□□ -2.19
RRI2Q12348 SIP4YJL089W 2490 nt1.4□□□□□ -2.19
RRI2Q12348 COG4YPR105C 2586 nt1.39□□□□□ -2.19
RRI2Q12348 YER137W-AYER137W-A 306 nt1.39□□□□□ -2.19
RRI2Q12348 YAL068W-AYAL068W-A 255 nt1.39□□□□□ -2.19
RRI2Q12348 YML007C-AYML007C-A 111 nt1.39□□□□□ -2.19
RRI2Q12348 ATG31YDR022C 591 nt1.38□□□□□ -2.19
RRI2Q12348 IRC23YOR044W 474 nt1.38□□□□□ -2.19
RRI2Q12348 YOR072W-AYOR072W-A 249 nt1.38□□□□□ -2.19
RRI2Q12348 ALY2YJL084C 3141 nt1.37□□□□□ -2.19
RRI2Q12348 YDR157WYDR157W 402 nt1.37□□□□□ -2.19
RRI2Q12348 RPL38YLR325C 237 nt1.37□□□□□ -2.19
RRI2Q12348 CLU1YMR012W 3834 nt1.37□□□□□ -2.19
RRI2Q12348 YBR221W-AYBR221W-A 105 nt1.37□□□□□ -2.19
RRI2Q12348 SPO75YLL005C 2607 nt1.37□□□□□ -2.19
RRI2Q12348 SET3YKR029C 2256 nt1.36□□□□□ -2.19
RRI2Q12348 YOR293C-AYOR293C-A 150 nt1.36□□□□□ -2.19
RRI2Q12348 YPR002C-AYPR002C-A 198 nt1.36□□□□□ -2.19
RRI2Q12348 RAD34YDR314C 2079 nt1.36□□□□□ -2.19
RRI2Q12348 PDE2YOR360C 1581 nt1.35□□□□□ -2.19
RRI2Q12348 STO1YMR125W 2586 nt1.35□□□□□ -2.19
RRI2Q12348 CDC36YDL165W 576 nt1.35□□□□□ -2.19
RRI2Q12348 RPS20YHL015W 366 nt1.35□□□□□ -2.19
RRI2Q12348 YBR200W-AYBR200W-A 165 nt1.35□□□□□ -2.19
RRI2Q12348 RIM20YOR275C 1986 nt1.35□□□□□ -2.19
RRI2Q12348 EAF1YDR359C 2949 nt1.35□□□□□ -2.19
RRI2Q12348 PKH2YOL100W 3246 nt1.34□□□□□ -2.19
RRI2Q12348 GPG1YGL121C 381 nt1.34□□□□□ -2.19
RRI2Q12348 YIL020C-AYIL020C-A 339 nt1.34□□□□□ -2.19
RRI2Q12348 YDR426CYDR426C 378 nt1.33□□□□□ -2.2
RRI2Q12348 YIR044CYIR044C 186 nt1.33□□□□□ -2.2
RRI2Q12348 CUL3YGR003W 2235 nt1.33□□□□□ -2.2
RRI2Q12348 PCC1YKR095W-A 267 nt1.32□□□□□ -2.2
RRI2Q12348 PBY1YBR094W 2262 nt1.32□□□□□ -2.2
RRI2Q12348 STB6YKL072W 2301 nt1.32□□□□□ -2.2
RRI2Q12348 AHC1YOR023C 1701 nt1.32□□□□□ -2.2
RRI2Q12348 SLD3YGL113W 2007 nt1.31□□□□□ -2.2
RRI2Q12348 YDL206WYDL206W 2289 nt1.31□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 86.5 ms