Protein–RNA interactions for Protein: Q04272

VPS20, Vacuolar protein sorting-associated protein 20, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS20Q04272 PAU24YBR301W 363 nt1.05□□□□□ -2.24
VPS20Q04272 CDC39YCR093W 6327 nt1.04□□□□□ -2.24
VPS20Q04272 CYC7YEL039C 342 nt1.04□□□□□ -2.24
VPS20Q04272 ZEO1YOL109W 342 nt1.04□□□□□ -2.24
VPS20Q04272 YBR200W-AYBR200W-A 165 nt1.04□□□□□ -2.24
VPS20Q04272 MMS4YBR098W 2076 nt1.03□□□□□ -2.24
VPS20Q04272 YLR171WYLR171W 390 nt1.03□□□□□ -2.24
VPS20Q04272 YLR287CYLR287C 1068 nt1.03□□□□□ -2.24
VPS20Q04272 YBL071CYBL071C 309 nt1.03□□□□□ -2.24
VPS20Q04272 SET3YKR029C 2256 nt1.03□□□□□ -2.25
VPS20Q04272 NPC2YDL046W 522 nt1.02□□□□□ -2.25
VPS20Q04272 LCD1YDR499W 2244 nt1.02□□□□□ -2.25
VPS20Q04272 RRT1YBL048W 312 nt1.02□□□□□ -2.25
VPS20Q04272 SLI15YBR156C 2097 nt1.02□□□□□ -2.25
VPS20Q04272 YKL202WYKL202W 582 nt1.01□□□□□ -2.25
VPS20Q04272 FYV7YLR068W 456 nt1.01□□□□□ -2.25
VPS20Q04272 ZIP2YGL249W 2115 nt1.01□□□□□ -2.25
VPS20Q04272 STO1YMR125W 2586 nt1.01□□□□□ -2.25
VPS20Q04272 YOR108C-AYOR108C-A 210 nt1□□□□□ -2.25
VPS20Q04272 DIE2YGR227W 1578 nt1□□□□□ -2.25
VPS20Q04272 PDE2YOR360C 1581 nt1□□□□□ -2.25
VPS20Q04272 YDL011CYDL011C 324 nt0.99□□□□□ -2.25
VPS20Q04272 RPB10YOR210W 213 nt0.99□□□□□ -2.25
VPS20Q04272 RIM20YOR275C 1986 nt0.99□□□□□ -2.25
VPS20Q04272 ALY2YJL084C 3141 nt0.99□□□□□ -2.25
VPS20Q04272 YEL030C-AYEL030C-A 315 nt0.98□□□□□ -2.25
VPS20Q04272 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
VPS20Q04272 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
VPS20Q04272 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
VPS20Q04272 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
VPS20Q04272 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
VPS20Q04272 IFH1YLR223C 3258 nt0.98□□□□□ -2.25
VPS20Q04272 YER006C-AYER006C-A 318 nt0.97□□□□□ -2.25
VPS20Q04272 IRC23YOR044W 474 nt0.97□□□□□ -2.25
VPS20Q04272 YDL206WYDL206W 2289 nt0.97□□□□□ -2.25
VPS20Q04272 AIM9YER080W 1884 nt0.97□□□□□ -2.25
VPS20Q04272 YJR003CYJR003C 1560 nt0.96□□□□□ -2.26
VPS20Q04272 YJL020W-AYJL020W-A 258 nt0.96□□□□□ -2.26
VPS20Q04272 snR41snR41 95 nt0.96□□□□□ -2.26
VPS20Q04272 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
VPS20Q04272 COG4YPR105C 2586 nt0.95□□□□□ -2.26
VPS20Q04272 WIP1YDR374W-A 270 nt0.95□□□□□ -2.26
VPS20Q04272 YMR290W-AYMR290W-A 348 nt0.95□□□□□ -2.26
VPS20Q04272 YOR192C-CYOR192C-C 237 nt0.95□□□□□ -2.26
VPS20Q04272 YOR199WYOR199W 330 nt0.95□□□□□ -2.26
VPS20Q04272 LOA1YPR139C 903 nt0.95□□□□□ -2.26
VPS20Q04272 NUP157YER105C 4176 nt0.95□□□□□ -2.26
VPS20Q04272 KAP120YPL125W 3099 nt0.95□□□□□ -2.26
VPS20Q04272 SLD3YGL113W 2007 nt0.94□□□□□ -2.26
VPS20Q04272 YLR101CYLR101C 396 nt0.94□□□□□ -2.26
VPS20Q04272 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
VPS20Q04272 YMR141W-AYMR141W-A 225 nt0.93□□□□□ -2.26
VPS20Q04272 TOM22YNL131W 459 nt0.93□□□□□ -2.26
VPS20Q04272 YPL229WYPL229W 621 nt0.93□□□□□ -2.26
VPS20Q04272 WAR1YML076C 2835 nt0.92□□□□□ -2.26
VPS20Q04272 YJL135WYJL135W 318 nt0.92□□□□□ -2.26
VPS20Q04272 GPG1YGL121C 381 nt0.91□□□□□ -2.26
VPS20Q04272 CBS1YDL069C 690 nt0.9□□□□□ -2.27
VPS20Q04272 NHP2YDL208W 471 nt0.9□□□□□ -2.27
VPS20Q04272 YKL083WYKL083W 615 nt0.9□□□□□ -2.27
VPS20Q04272 YAR047CYAR047C 321 nt0.89□□□□□ -2.27
VPS20Q04272 YOL160WYOL160W 342 nt0.89□□□□□ -2.27
VPS20Q04272 YPL261CYPL261C 309 nt0.89□□□□□ -2.27
VPS20Q04272 snR51snR51 107 nt0.89□□□□□ -2.27
VPS20Q04272 PKH2YOL100W 3246 nt0.89□□□□□ -2.27
VPS20Q04272 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
VPS20Q04272 snR72snR72 98 nt0.88□□□□□ -2.27
VPS20Q04272 YAR009CYAR009C 3591 nt0.87□□□□□ -2.27
VPS20Q04272 SDH7YDR511W 402 nt0.86□□□□□ -2.27
VPS20Q04272 YDR521WYDR521W 336 nt0.86□□□□□ -2.27
VPS20Q04272 UBC7YMR022W 498 nt0.86□□□□□ -2.27
VPS20Q04272 YNL058CYNL058C 951 nt0.86□□□□□ -2.27
VPS20Q04272 ATP19YOL077W-A 207 nt0.86□□□□□ -2.27
VPS20Q04272 PAN2YGL094C 3348 nt0.86□□□□□ -2.27
VPS20Q04272 YDL196WYDL196W 330 nt0.85□□□□□ -2.27
VPS20Q04272 YGR174W-AYGR174W-A 87 nt0.85□□□□□ -2.27
VPS20Q04272 IES4YOR189W 351 nt0.85□□□□□ -2.27
VPS20Q04272 PCF11YDR228C 1881 nt0.84□□□□□ -2.27
VPS20Q04272 YHL041WYHL041W 450 nt0.84□□□□□ -2.27
VPS20Q04272 RAD34YDR314C 2079 nt0.84□□□□□ -2.28
VPS20Q04272 INP2YMR163C 2118 nt0.83□□□□□ -2.28
VPS20Q04272 CUL3YGR003W 2235 nt0.83□□□□□ -2.28
VPS20Q04272 ALG13YGL047W 609 nt0.83□□□□□ -2.28
VPS20Q04272 YGR042WYGR042W 816 nt0.83□□□□□ -2.28
VPS20Q04272 YIR044CYIR044C 186 nt0.83□□□□□ -2.28
VPS20Q04272 CMC4YMR194C-B 222 nt0.83□□□□□ -2.28
VPS20Q04272 GEA2YEL022W 4380 nt0.83□□□□□ -2.28
VPS20Q04272 DBP6YNR038W 1890 nt0.82□□□□□ -2.28
VPS20Q04272 MYO1YHR023W 5787 nt0.82□□□□□ -2.28
VPS20Q04272 YAP6YDR259C 1152 nt0.82□□□□□ -2.28
VPS20Q04272 ISD11YER048W-A 285 nt0.81□□□□□ -2.28
VPS20Q04272 RPL26AYLR344W 384 nt0.81□□□□□ -2.28
VPS20Q04272 MRPL50YNR022C 420 nt0.81□□□□□ -2.28
VPS20Q04272 RKR1YMR247C 4689 nt0.8□□□□□ -2.28
VPS20Q04272 YIL142C-AYIL142C-A 333 nt0.8□□□□□ -2.28
VPS20Q04272 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
VPS20Q04272 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 106 ms