Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 AL691432.2-201ENST00000607222 2038 ntBASIC19.38■□□□□ 0.69
HMGCS1Q01581 AC011767.1-201ENST00000617410 1153 ntBASIC19.38■□□□□ 0.69
HMGCS1Q01581 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGCS1Q01581 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGCS1Q01581 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 PGM5P4-201ENST00000421970 445 ntBASIC19.37■□□□□ 0.69
HMGCS1Q01581 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
HMGCS1Q01581 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCS1Q01581 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 AC125437.2-201ENST00000625180 2167 ntBASIC19.36■□□□□ 0.69
HMGCS1Q01581 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 CNN2P6-201ENST00000439038 900 ntBASIC19.36■□□□□ 0.69
HMGCS1Q01581 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 AL162412.1-201ENST00000567129 965 ntBASIC19.36■□□□□ 0.69
HMGCS1Q01581 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCS1Q01581 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCS1Q01581 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 DUX4L16-201ENST00000555130 1264 ntBASIC19.35■□□□□ 0.69
HMGCS1Q01581 AC022517.1-201ENST00000592429 346 ntBASIC19.35■□□□□ 0.69
HMGCS1Q01581 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 BX119927.1-201ENST00000636596 1552 ntBASIC19.35■□□□□ 0.69
HMGCS1Q01581 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCS1Q01581 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS1Q01581 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS1Q01581 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HMGCS1Q01581 AC007952.6-201ENST00000573168 2673 ntBASIC19.34■□□□□ 0.69
HMGCS1Q01581 AC003957.1-201ENST00000625108 2673 ntBASIC19.34■□□□□ 0.69
HMGCS1Q01581 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms