Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RPS3AP61247 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RPS3AP61247 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS3AP61247 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS3AP61247 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RPS3AP61247 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RPS3AP61247 AC006128.1-201ENST00000624704 1661 ntBASIC18.79■□□□□ 0.6
RPS3AP61247 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
RPS3AP61247 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS3AP61247 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RPS3AP61247 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RPS3AP61247 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 AC006970.2-201ENST00000450065 779 ntBASIC18.78■□□□□ 0.6
RPS3AP61247 AC245052.3-201ENST00000450182 901 ntBASIC18.78■□□□□ 0.6
RPS3AP61247 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.78■□□□□ 0.6
RPS3AP61247 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RPS3AP61247 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS3AP61247 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS3AP61247 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS3AP61247 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS3AP61247 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RPS3AP61247 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS3AP61247 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS3AP61247 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
RPS3AP61247 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.77■□□□□ 0.59
RPS3AP61247 AC112907.3-201ENST00000577781 2400 ntBASIC18.76■□□□□ 0.59
RPS3AP61247 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RPS3AP61247 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS3AP61247 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS3AP61247 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS3AP61247 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPS3AP61247 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RPS3AP61247 PLK5-205ENST00000642079 1969 ntBASIC18.75■□□□□ 0.59
RPS3AP61247 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS3AP61247 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS3AP61247 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS3AP61247 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS3AP61247 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RPS3AP61247 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
RPS3AP61247 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS3AP61247 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.75■□□□□ 0.59
RPS3AP61247 RAP2CP1-201ENST00000605103 478 ntBASIC18.75■□□□□ 0.59
RPS3AP61247 AC243732.1-201ENST00000612648 864 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms