Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCR4P61073 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCR4P61073 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CXCR4P61073 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.32■□□□□ 0.52
CXCR4P61073 AC131212.1-201ENST00000613771 668 ntBASIC18.32■□□□□ 0.52
CXCR4P61073 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 BX119927.1-201ENST00000636596 1552 ntBASIC18.32■□□□□ 0.52
CXCR4P61073 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CXCR4P61073 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCR4P61073 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCR4P61073 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCR4P61073 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 MIR572-201ENST00000384983 95 ntBASIC18.31■□□□□ 0.52
CXCR4P61073 PBX2P1-201ENST00000493219 1291 ntBASIC18.31■□□□□ 0.52
CXCR4P61073 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CXCR4P61073 AC053503.5-201ENST00000601508 636 ntBASIC18.31■□□□□ 0.52
CXCR4P61073 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCR4P61073 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCR4P61073 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.3■□□□□ 0.52
CXCR4P61073 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CXCR4P61073 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCR4P61073 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CXCR4P61073 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCR4P61073 AC096631.2-201ENST00000436136 790 ntBASIC18.3■□□□□ 0.52
CXCR4P61073 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.3■□□□□ 0.52
CXCR4P61073 EEF1DP3-203ENST00000566025 782 ntBASIC18.3■□□□□ 0.52
CXCR4P61073 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCR4P61073 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.3■□□□□ 0.52
CXCR4P61073 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCR4P61073 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 AC061975.6-201ENST00000579045 1553 ntBASIC18.3■□□□□ 0.52
CXCR4P61073 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCR4P61073 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CXCR4P61073 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CXCR4P61073 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCR4P61073 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CXCR4P61073 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.29■□□□□ 0.52
CXCR4P61073 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CXCR4P61073 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCR4P61073 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CXCR4P61073 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCR4P61073 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCR4P61073 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CXCR4P61073 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.28■□□□□ 0.52
CXCR4P61073 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.28■□□□□ 0.52
CXCR4P61073 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms