Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CKS1BP61024 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CKS1BP61024 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CKS1BP61024 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.01□□□□□ -0.17
CKS1BP61024 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CKS1BP61024 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 FEM1AP1-201ENST00000431297 1995 ntBASIC14.01□□□□□ -0.17
CKS1BP61024 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.01□□□□□ -0.17
CKS1BP61024 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS1BP61024 SYT6-210ENST00000641643 1587 ntBASIC14□□□□□ -0.17
CKS1BP61024 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 PTCHD3P2-201ENST00000424937 1205 ntBASIC14□□□□□ -0.17
CKS1BP61024 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 OR2A1-AS1-204ENST00000470435 602 ntBASIC14□□□□□ -0.17
CKS1BP61024 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14□□□□□ -0.17
CKS1BP61024 MIR3621-201ENST00000580529 85 ntBASIC14□□□□□ -0.17
CKS1BP61024 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 AC010525.1-201ENST00000585559 441 ntBASIC14□□□□□ -0.17
CKS1BP61024 AL138724.1-201ENST00000606771 1088 ntBASIC14□□□□□ -0.17
CKS1BP61024 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CKS1BP61024 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 AFG3L1P-217ENST00000557444 2447 ntBASIC14□□□□□ -0.17
CKS1BP61024 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS1BP61024 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CKS1BP61024 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS1BP61024 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS1BP61024 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.99□□□□□ -0.17
CKS1BP61024 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS1BP61024 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CKS1BP61024 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CKS1BP61024 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 AP005435.1-201ENST00000529293 1178 ntBASIC13.99□□□□□ -0.17
CKS1BP61024 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS1BP61024 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS1BP61024 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS1BP61024 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.99□□□□□ -0.17
CKS1BP61024 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.99□□□□□ -0.17
CKS1BP61024 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS1BP61024 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS1BP61024 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms