Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.39■■□□□ 1.82
RIPK4P57078 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.39■■□□□ 1.82
RIPK4P57078 AC008687.6-201ENST00000596318 630 ntBASIC26.39■■□□□ 1.82
RIPK4P57078 ITM2C-210ENST00000620962 501 ntBASIC26.39■■□□□ 1.82
RIPK4P57078 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.39■■□□□ 1.81
RIPK4P57078 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.39■■□□□ 1.81
RIPK4P57078 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RIPK4P57078 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RIPK4P57078 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.38■■□□□ 1.81
RIPK4P57078 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.38■■□□□ 1.81
RIPK4P57078 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.38■■□□□ 1.81
RIPK4P57078 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.38■■□□□ 1.81
RIPK4P57078 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.38■■□□□ 1.81
RIPK4P57078 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.38■■□□□ 1.81
RIPK4P57078 TMEM191A-211ENST00000637163 1067 ntBASIC26.38■■□□□ 1.81
RIPK4P57078 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 DET1-207ENST00000564406 2315 ntTSL 2 BASIC26.38■■□□□ 1.81
RIPK4P57078 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RIPK4P57078 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RIPK4P57078 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RIPK4P57078 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.37■■□□□ 1.81
RIPK4P57078 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.37■■□□□ 1.81
RIPK4P57078 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RIPK4P57078 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.37■■□□□ 1.81
RIPK4P57078 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.37■■□□□ 1.81
RIPK4P57078 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 AC120498.8-201ENST00000614275 531 ntBASIC26.37■■□□□ 1.81
RIPK4P57078 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.37■■□□□ 1.81
RIPK4P57078 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RIPK4P57078 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RIPK4P57078 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.37■■□□□ 1.81
RIPK4P57078 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 AC092667.1-201ENST00000434301 2586 ntBASIC26.36■■□□□ 1.81
RIPK4P57078 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.36■■□□□ 1.81
RIPK4P57078 AL157384.1-201ENST00000445995 2473 ntBASIC26.36■■□□□ 1.81
RIPK4P57078 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.36■■□□□ 1.81
RIPK4P57078 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 AC128676.1-201ENST00000454392 318 ntBASIC26.36■■□□□ 1.81
RIPK4P57078 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RIPK4P57078 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC26.36■■□□□ 1.81
RIPK4P57078 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 KRT8P17-201ENST00000453110 1448 ntBASIC26.36■■□□□ 1.81
RIPK4P57078 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RIPK4P57078 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RIPK4P57078 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.35■■□□□ 1.81
RIPK4P57078 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIPK4P57078 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RIPK4P57078 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RIPK4P57078 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.35■■□□□ 1.81
RIPK4P57078 AL031963.3-201ENST00000606441 850 ntBASIC26.35■■□□□ 1.81
RIPK4P57078 AC073648.6-201ENST00000641589 218 ntBASIC26.35■■□□□ 1.81
RIPK4P57078 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
RIPK4P57078 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.35■■□□□ 1.81
RIPK4P57078 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 KRT8P20-201ENST00000423953 1409 ntBASIC26.34■■□□□ 1.81
RIPK4P57078 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.34■■□□□ 1.81
RIPK4P57078 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 PRORSD1P-201ENST00000295112 541 ntBASIC26.34■■□□□ 1.81
RIPK4P57078 KRT18P29-201ENST00000397031 1267 ntBASIC26.34■■□□□ 1.81
RIPK4P57078 AC233263.1-201ENST00000578059 224 ntBASIC26.34■■□□□ 1.81
RIPK4P57078 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.34■■□□□ 1.81
RIPK4P57078 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
RIPK4P57078 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RIPK4P57078 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26.34■■□□□ 1.81
RIPK4P57078 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.33■■□□□ 1.81
RIPK4P57078 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIPK4P57078 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RIPK4P57078 POM121L13P-201ENST00000422362 380 ntBASIC26.33■■□□□ 1.81
RIPK4P57078 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.33■■□□□ 1.81
RIPK4P57078 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RIPK4P57078 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RIPK4P57078 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
RIPK4P57078 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.32■■□□□ 1.8
RIPK4P57078 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms