Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.41■□□□□ 0.38
ATP1B3P54709 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP1B3P54709 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP1B3P54709 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP1B3P54709 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 AC138932.1-201ENST00000534164 6830 ntBASIC17.41■□□□□ 0.38
ATP1B3P54709 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP1B3P54709 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATP1B3P54709 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATP1B3P54709 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP1B3P54709 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP1B3P54709 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP1B3P54709 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP1B3P54709 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP1B3P54709 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 UBE2DNL-204ENST00000602536 740 ntBASIC17.4■□□□□ 0.38
ATP1B3P54709 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP1B3P54709 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP1B3P54709 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP1B3P54709 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP1B3P54709 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ATP1B3P54709 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.39■□□□□ 0.38
ATP1B3P54709 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 AC099778.1-201ENST00000568593 1911 ntBASIC17.39■□□□□ 0.37
ATP1B3P54709 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATP1B3P54709 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP1B3P54709 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP1B3P54709 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATP1B3P54709 MYCNOS-205ENST00000641950 531 ntBASIC17.39■□□□□ 0.37
ATP1B3P54709 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATP1B3P54709 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP1B3P54709 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP1B3P54709 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP1B3P54709 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP1B3P54709 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP1B3P54709 AC097381.1-201ENST00000429019 1296 ntBASIC17.38■□□□□ 0.37
ATP1B3P54709 AC034268.1-201ENST00000441047 882 ntBASIC17.38■□□□□ 0.37
ATP1B3P54709 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP1B3P54709 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP1B3P54709 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP1B3P54709 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATP1B3P54709 AC112907.3-201ENST00000577781 2400 ntBASIC17.38■□□□□ 0.37
ATP1B3P54709 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP1B3P54709 KRT8P36-201ENST00000489121 1440 ntBASIC17.38■□□□□ 0.37
ATP1B3P54709 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP1B3P54709 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP1B3P54709 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP1B3P54709 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ATP1B3P54709 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP1B3P54709 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATP1B3P54709 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms