Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YDR269CYDR269C 324 nt1.14□□□□□ -2.23
YNL040WP53960 RPL34BYIL052C 366 nt1.14□□□□□ -2.23
YNL040WP53960 YOR161W-BYOR161W-B 261 nt1.14□□□□□ -2.23
YNL040WP53960 MUK1YPL070W 1839 nt1.14□□□□□ -2.23
YNL040WP53960 RFX1YLR176C 2436 nt1.14□□□□□ -2.23
YNL040WP53960 AIM9YER080W 1884 nt1.14□□□□□ -2.23
YNL040WP53960 RSM22YKL155C 1887 nt1.14□□□□□ -2.23
YNL040WP53960 YIL059CYIL059C 366 nt1.13□□□□□ -2.23
YNL040WP53960 HIT1YJR055W 495 nt1.13□□□□□ -2.23
YNL040WP53960 YKL083WYKL083W 615 nt1.13□□□□□ -2.23
YNL040WP53960 ISF1YMR081C 1017 nt1.13□□□□□ -2.23
YNL040WP53960 YMR141W-AYMR141W-A 225 nt1.13□□□□□ -2.23
YNL040WP53960 RRT1YBL048W 312 nt1.13□□□□□ -2.23
YNL040WP53960 EFR3YMR212C 2349 nt1.13□□□□□ -2.23
YNL040WP53960 VPS54YDR027C 2670 nt1.13□□□□□ -2.23
YNL040WP53960 SLX4YLR135W 2247 nt1.13□□□□□ -2.23
YNL040WP53960 NOC3YLR002C 1992 nt1.12□□□□□ -2.23
YNL040WP53960 YGL217CYGL217C 342 nt1.12□□□□□ -2.23
YNL040WP53960 MRPL31YKL138C 396 nt1.12□□□□□ -2.23
YNL040WP53960 RRT15YLR162W-A 189 nt1.12□□□□□ -2.23
YNL040WP53960 YOR293C-AYOR293C-A 150 nt1.12□□□□□ -2.23
YNL040WP53960 YLL032CYLL032C 2478 nt1.11□□□□□ -2.23
YNL040WP53960 YDL211CYDL211C 1119 nt1.11□□□□□ -2.23
YNL040WP53960 YHL041WYHL041W 450 nt1.11□□□□□ -2.23
YNL040WP53960 YHR138CYHR138C 345 nt1.11□□□□□ -2.23
YNL040WP53960 YKL202WYKL202W 582 nt1.11□□□□□ -2.23
YNL040WP53960 YLR154W-FYLR154W-F 141 nt1.11□□□□□ -2.23
YNL040WP53960 YMR001C-AYMR001C-A 231 nt1.11□□□□□ -2.23
YNL040WP53960 YPL229WYPL229W 621 nt1.11□□□□□ -2.23
YNL040WP53960 SEC3YER008C 4011 nt1.11□□□□□ -2.23
YNL040WP53960 AI5_ALPHAQ0070 1893 nt1.1□□□□□ -2.23
YNL040WP53960 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
YNL040WP53960 YOR053WYOR053W 342 nt1.1□□□□□ -2.23
YNL040WP53960 PIG1YLR273C 1947 nt1.1□□□□□ -2.23
YNL040WP53960 SLY1YDR189W 2001 nt1.1□□□□□ -2.23
YNL040WP53960 SAS3YBL052C 2496 nt1.09□□□□□ -2.23
YNL040WP53960 YDR182W-AYDR182W-A 204 nt1.09□□□□□ -2.23
YNL040WP53960 UPS1YLR193C 528 nt1.09□□□□□ -2.23
YNL040WP53960 YPR063CYPR063C 423 nt1.09□□□□□ -2.23
YNL040WP53960 NUT2YPR168W 474 nt1.09□□□□□ -2.23
YNL040WP53960 AIM44YPL158C 2277 nt1.09□□□□□ -2.24
YNL040WP53960 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
YNL040WP53960 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
YNL040WP53960 YER137W-AYER137W-A 306 nt1.08□□□□□ -2.24
YNL040WP53960 YGR174W-AYGR174W-A 87 nt1.08□□□□□ -2.24
YNL040WP53960 BSC3YLR465C 309 nt1.08□□□□□ -2.24
YNL040WP53960 CLU1YMR012W 3834 nt1.08□□□□□ -2.24
YNL040WP53960 ENV11YGR071C 2583 nt1.08□□□□□ -2.24
YNL040WP53960 YCS4YLR272C 3531 nt1.07□□□□□ -2.24
YNL040WP53960 SDH2YLL041C 801 nt1.07□□□□□ -2.24
YNL040WP53960 RPB10YOR210W 213 nt1.07□□□□□ -2.24
YNL040WP53960 snR14snR14 160 nt1.07□□□□□ -2.24
YNL040WP53960 MYO1YHR023W 5787 nt1.07□□□□□ -2.24
YNL040WP53960 NUP188YML103C 4968 nt1.06□□□□□ -2.24
YNL040WP53960 YDR157WYDR157W 402 nt1.06□□□□□ -2.24
YNL040WP53960 YFL019CYFL019C 354 nt1.06□□□□□ -2.24
YNL040WP53960 YMR175W-AYMR175W-A 195 nt1.06□□□□□ -2.24
YNL040WP53960 snR51snR51 107 nt1.06□□□□□ -2.24
YNL040WP53960 APL1YJR005W 2103 nt1.06□□□□□ -2.24
YNL040WP53960 OST1YJL002C 1431 nt1.06□□□□□ -2.24
YNL040WP53960 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
YNL040WP53960 YAL068W-AYAL068W-A 255 nt1.05□□□□□ -2.24
YNL040WP53960 YLL020CYLL020C 306 nt1.04□□□□□ -2.24
YNL040WP53960 YOR121CYOR121C 306 nt1.04□□□□□ -2.24
YNL040WP53960 NST1YNL091W 3723 nt1.04□□□□□ -2.24
YNL040WP53960 SPT21YMR179W 2277 nt1.04□□□□□ -2.24
YNL040WP53960 MPT5YGL178W 2580 nt1.03□□□□□ -2.24
YNL040WP53960 BUD3YCL014W 4911 nt1.03□□□□□ -2.24
YNL040WP53960 snR72snR72 98 nt1.03□□□□□ -2.24
YNL040WP53960 YJL135WYJL135W 318 nt1.03□□□□□ -2.24
YNL040WP53960 YMR242W-AYMR242W-A 90 nt1.03□□□□□ -2.24
YNL040WP53960 YNL058CYNL058C 951 nt1.03□□□□□ -2.24
YNL040WP53960 RPS30BYOR182C 192 nt1.03□□□□□ -2.24
YNL040WP53960 SCW11YGL028C 1629 nt1.03□□□□□ -2.24
YNL040WP53960 NUT1YGL151W 3399 nt1.02□□□□□ -2.25
YNL040WP53960 YAR009CYAR009C 3591 nt1.02□□□□□ -2.25
YNL040WP53960 SWI4YER111C 3282 nt1.02□□□□□ -2.25
YNL040WP53960 ZIP2YGL249W 2115 nt1.02□□□□□ -2.25
YNL040WP53960 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
YNL040WP53960 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
YNL040WP53960 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
YNL040WP53960 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
YNL040WP53960 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
YNL040WP53960 YOR029WYOR029W 336 nt1.01□□□□□ -2.25
YNL040WP53960 IRC23YOR044W 474 nt1.01□□□□□ -2.25
YNL040WP53960 YOR072W-AYOR072W-A 249 nt1.01□□□□□ -2.25
YNL040WP53960 NUP145YGL092W 3954 nt1□□□□□ -2.25
YNL040WP53960 NPC2YDL046W 522 nt1□□□□□ -2.25
YNL040WP53960 YDR118W-AYDR118W-A 117 nt1□□□□□ -2.25
YNL040WP53960 YOR199WYOR199W 330 nt1□□□□□ -2.25
YNL040WP53960 RPS20YHL015W 366 nt0.99□□□□□ -2.25
YNL040WP53960 INP2YMR163C 2118 nt0.98□□□□□ -2.25
YNL040WP53960 YOL160WYOL160W 342 nt0.98□□□□□ -2.25
YNL040WP53960 YJR003CYJR003C 1560 nt0.97□□□□□ -2.25
YNL040WP53960 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
YNL040WP53960 ATG31YDR022C 591 nt0.97□□□□□ -2.25
YNL040WP53960 YML007C-AYML007C-A 111 nt0.97□□□□□ -2.25
YNL040WP53960 YBR012CYBR012C 420 nt0.97□□□□□ -2.25
YNL040WP53960 LCD1YDR499W 2244 nt0.96□□□□□ -2.26
YNL040WP53960 INA22YIR024C 651 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 48 ms