Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 PAU2YEL049W 363 nt1.03□□□□□ -2.24
SSU72P53538 YGR174W-AYGR174W-A 87 nt1.03□□□□□ -2.24
SSU72P53538 YHR138CYHR138C 345 nt1.03□□□□□ -2.24
SSU72P53538 RPL34BYIL052C 366 nt1.03□□□□□ -2.24
SSU72P53538 YKL083WYKL083W 615 nt1.03□□□□□ -2.24
SSU72P53538 SPO75YLL005C 2607 nt1.03□□□□□ -2.24
SSU72P53538 MUK1YPL070W 1839 nt1.03□□□□□ -2.25
SSU72P53538 YJR029WYJR029W 5268 nt1.02□□□□□ -2.25
SSU72P53538 YPR137C-BYPR137C-B 5268 nt1.02□□□□□ -2.25
SSU72P53538 YFL019CYFL019C 354 nt1.02□□□□□ -2.25
SSU72P53538 MRPL31YKL138C 396 nt1.02□□□□□ -2.25
SSU72P53538 BSC3YLR465C 309 nt1.02□□□□□ -2.25
SSU72P53538 ISF1YMR081C 1017 nt1.02□□□□□ -2.25
SSU72P53538 RPL33BYOR234C 324 nt1.02□□□□□ -2.25
SSU72P53538 YLL032CYLL032C 2478 nt1.01□□□□□ -2.25
SSU72P53538 YDR157WYDR157W 402 nt1.01□□□□□ -2.25
SSU72P53538 RPL40BYKR094C 387 nt1.01□□□□□ -2.25
SSU72P53538 YOR293C-AYOR293C-A 150 nt1.01□□□□□ -2.25
SSU72P53538 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
SSU72P53538 PIG1YLR273C 1947 nt1.01□□□□□ -2.25
SSU72P53538 SAS3YBL052C 2496 nt1□□□□□ -2.25
SSU72P53538 RAD50YNL250W 3939 nt1□□□□□ -2.25
SSU72P53538 YAL068W-AYAL068W-A 255 nt1□□□□□ -2.25
SSU72P53538 NUT2YPR168W 474 nt1□□□□□ -2.25
SSU72P53538 SGO1YOR073W 1773 nt1□□□□□ -2.25
SSU72P53538 YHL041WYHL041W 450 nt0.99□□□□□ -2.25
SSU72P53538 NOC3YLR002C 1992 nt0.98□□□□□ -2.25
SSU72P53538 YER137W-AYER137W-A 306 nt0.98□□□□□ -2.25
SSU72P53538 YMR141W-AYMR141W-A 225 nt0.98□□□□□ -2.25
SSU72P53538 YOR121CYOR121C 306 nt0.98□□□□□ -2.25
SSU72P53538 TIM18YOR297C 579 nt0.98□□□□□ -2.25
SSU72P53538 SLX4YLR135W 2247 nt0.98□□□□□ -2.25
SSU72P53538 AI5_ALPHAQ0070 1893 nt0.98□□□□□ -2.25
SSU72P53538 ENV11YGR071C 2583 nt0.98□□□□□ -2.25
SSU72P53538 YLL054CYLL054C 2532 nt0.97□□□□□ -2.25
SSU72P53538 APL2YKL135C 2181 nt0.97□□□□□ -2.25
SSU72P53538 VPS54YDR027C 2670 nt0.97□□□□□ -2.25
SSU72P53538 NUP188YML103C 4968 nt0.97□□□□□ -2.25
SSU72P53538 YDL211CYDL211C 1119 nt0.97□□□□□ -2.25
SSU72P53538 YDR182W-AYDR182W-A 204 nt0.97□□□□□ -2.25
SSU72P53538 YGL217CYGL217C 342 nt0.97□□□□□ -2.25
SSU72P53538 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
SSU72P53538 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
SSU72P53538 SDH2YLL041C 801 nt0.97□□□□□ -2.25
SSU72P53538 UPS1YLR193C 528 nt0.97□□□□□ -2.25
SSU72P53538 YNL058CYNL058C 951 nt0.97□□□□□ -2.25
SSU72P53538 SEC3YER008C 4011 nt0.97□□□□□ -2.25
SSU72P53538 YMR175W-AYMR175W-A 195 nt0.96□□□□□ -2.26
SSU72P53538 RPB10YOR210W 213 nt0.96□□□□□ -2.26
SSU72P53538 snR51snR51 107 nt0.96□□□□□ -2.26
SSU72P53538 YCS4YLR272C 3531 nt0.95□□□□□ -2.26
SSU72P53538 NUT1YGL151W 3399 nt0.95□□□□□ -2.26
SSU72P53538 YLL020CYLL020C 306 nt0.95□□□□□ -2.26
SSU72P53538 YMR242W-AYMR242W-A 90 nt0.95□□□□□ -2.26
SSU72P53538 CLU1YMR012W 3834 nt0.94□□□□□ -2.26
SSU72P53538 IML1YJR138W 4755 nt0.94□□□□□ -2.26
SSU72P53538 PAC1YOR269W 1485 nt0.94□□□□□ -2.26
SSU72P53538 ZIP2YGL249W 2115 nt0.94□□□□□ -2.26
SSU72P53538 IRC23YOR044W 474 nt0.94□□□□□ -2.26
SSU72P53538 YOR108C-AYOR108C-A 210 nt0.94□□□□□ -2.26
SSU72P53538 SCW11YGL028C 1629 nt0.93□□□□□ -2.26
SSU72P53538 KAP120YPL125W 3099 nt0.93□□□□□ -2.26
SSU72P53538 YDR118W-AYDR118W-A 117 nt0.93□□□□□ -2.26
SSU72P53538 YOR072W-AYOR072W-A 249 nt0.93□□□□□ -2.26
SSU72P53538 YOR161W-BYOR161W-B 261 nt0.93□□□□□ -2.26
SSU72P53538 YPR170W-AYPR170W-A 186 nt0.93□□□□□ -2.26
SSU72P53538 IFH1YLR223C 3258 nt0.93□□□□□ -2.26
SSU72P53538 INP2YMR163C 2118 nt0.92□□□□□ -2.26
SSU72P53538 YJR003CYJR003C 1560 nt0.92□□□□□ -2.26
SSU72P53538 SIP4YJL089W 2490 nt0.92□□□□□ -2.26
SSU72P53538 NPC2YDL046W 522 nt0.92□□□□□ -2.26
SSU72P53538 YDR169C-AYDR169C-A 150 nt0.92□□□□□ -2.26
SSU72P53538 YOL160WYOL160W 342 nt0.92□□□□□ -2.26
SSU72P53538 YOR199WYOR199W 330 nt0.92□□□□□ -2.26
SSU72P53538 snR72snR72 98 nt0.91□□□□□ -2.26
SSU72P53538 snR14snR14 160 nt0.91□□□□□ -2.26
SSU72P53538 YPL261CYPL261C 309 nt0.91□□□□□ -2.26
SSU72P53538 SMC1YFL008W 3678 nt0.91□□□□□ -2.26
SSU72P53538 YGR130CYGR130C 2451 nt0.91□□□□□ -2.26
SSU72P53538 MPT5YGL178W 2580 nt0.9□□□□□ -2.27
SSU72P53538 ATG31YDR022C 591 nt0.9□□□□□ -2.27
SSU72P53538 RPS20YHL015W 366 nt0.9□□□□□ -2.27
SSU72P53538 YJL135WYJL135W 318 nt0.9□□□□□ -2.27
SSU72P53538 RPL38YLR325C 237 nt0.9□□□□□ -2.27
SSU72P53538 YML007C-AYML007C-A 111 nt0.9□□□□□ -2.27
SSU72P53538 YPR012WYPR012W 255 nt0.9□□□□□ -2.27
SSU72P53538 BEM2YER155C 6504 nt0.9□□□□□ -2.27
SSU72P53538 SPT21YMR179W 2277 nt0.9□□□□□ -2.27
SSU72P53538 PIP2YOR363C 2991 nt0.9□□□□□ -2.27
SSU72P53538 AIM44YPL158C 2277 nt0.89□□□□□ -2.27
SSU72P53538 SLI15YBR156C 2097 nt0.89□□□□□ -2.27
SSU72P53538 YAL063C-AYAL063C-A 291 nt0.89□□□□□ -2.27
SSU72P53538 YAR053WYAR053W 297 nt0.89□□□□□ -2.27
SSU72P53538 YMR290W-AYMR290W-A 348 nt0.89□□□□□ -2.27
SSU72P53538 YPR002C-AYPR002C-A 198 nt0.89□□□□□ -2.27
SSU72P53538 EAF1YDR359C 2949 nt0.88□□□□□ -2.27
SSU72P53538 SWI4YER111C 3282 nt0.88□□□□□ -2.27
SSU72P53538 LCD1YDR499W 2244 nt0.88□□□□□ -2.27
SSU72P53538 YGR035CYGR035C 351 nt0.88□□□□□ -2.27
SSU72P53538 ANS1YHR126C 480 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 142 ms