Protein–RNA interactions for Protein: P53437

RRN9, RNA polymerase I-specific transcription initiation factor RRN9, yeastyeast

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRN9P53437 YAL063C-AYAL063C-A 291 nt1.28□□□□□ -2.2
RRN9P53437 VPS54YDR027C 2670 nt1.28□□□□□ -2.2
RRN9P53437 MAD1YGL086W 2250 nt1.27□□□□□ -2.21
RRN9P53437 RSM22YKL155C 1887 nt1.27□□□□□ -2.21
RRN9P53437 YAR053WYAR053W 297 nt1.27□□□□□ -2.21
RRN9P53437 YMR175W-AYMR175W-A 195 nt1.27□□□□□ -2.21
RRN9P53437 YMR242W-AYMR242W-A 90 nt1.27□□□□□ -2.21
RRN9P53437 CDC31YOR257W 486 nt1.27□□□□□ -2.21
RRN9P53437 AZF1YOR113W 2745 nt1.27□□□□□ -2.21
RRN9P53437 APL2YKL135C 2181 nt1.27□□□□□ -2.21
RRN9P53437 SCW11YGL028C 1629 nt1.26□□□□□ -2.21
RRN9P53437 snR72snR72 98 nt1.26□□□□□ -2.21
RRN9P53437 YDR182W-AYDR182W-A 204 nt1.26□□□□□ -2.21
RRN9P53437 YGR035CYGR035C 351 nt1.26□□□□□ -2.21
RRN9P53437 VPS55YJR044C 423 nt1.26□□□□□ -2.21
RRN9P53437 YOR029WYOR029W 336 nt1.26□□□□□ -2.21
RRN9P53437 YOR108C-AYOR108C-A 210 nt1.26□□□□□ -2.21
RRN9P53437 AIM44YPL158C 2277 nt1.26□□□□□ -2.21
RRN9P53437 PBY1YBR094W 2262 nt1.26□□□□□ -2.21
RRN9P53437 INP2YMR163C 2118 nt1.25□□□□□ -2.21
RRN9P53437 CDC36YDL165W 576 nt1.25□□□□□ -2.21
RRN9P53437 ATG31YDR022C 591 nt1.25□□□□□ -2.21
RRN9P53437 YML007C-AYML007C-A 111 nt1.25□□□□□ -2.21
RRN9P53437 BIL1YOR304C-A 231 nt1.25□□□□□ -2.21
RRN9P53437 AHC1YOR023C 1701 nt1.25□□□□□ -2.21
RRN9P53437 NPC2YDL046W 522 nt1.24□□□□□ -2.21
RRN9P53437 YJL135WYJL135W 318 nt1.24□□□□□ -2.21
RRN9P53437 YOR199WYOR199W 330 nt1.24□□□□□ -2.21
RRN9P53437 YPL261CYPL261C 309 nt1.24□□□□□ -2.21
RRN9P53437 EST2YLR318W 2655 nt1.23□□□□□ -2.21
RRN9P53437 CDC25YLR310C 4770 nt1.23□□□□□ -2.21
RRN9P53437 YDL211CYDL211C 1119 nt1.23□□□□□ -2.21
RRN9P53437 FIG2YCR089W 4830 nt1.23□□□□□ -2.21
RRN9P53437 SPC98YNL126W 2541 nt1.23□□□□□ -2.21
RRN9P53437 ENV11YGR071C 2583 nt1.22□□□□□ -2.21
RRN9P53437 RAD9YDR217C 3930 nt1.22□□□□□ -2.21
RRN9P53437 RIM20YOR275C 1986 nt1.22□□□□□ -2.21
RRN9P53437 YDR426CYDR426C 378 nt1.22□□□□□ -2.21
RRN9P53437 YHL046W-AYHL046W-A 327 nt1.22□□□□□ -2.21
RRN9P53437 RPL38YLR325C 237 nt1.22□□□□□ -2.21
RRN9P53437 YPR002C-AYPR002C-A 198 nt1.22□□□□□ -2.21
RRN9P53437 MPT5YGL178W 2580 nt1.22□□□□□ -2.21
RRN9P53437 MSN5YDR335W 3675 nt1.22□□□□□ -2.21
RRN9P53437 YNL284C-BYNL284C-B 5268 nt1.21□□□□□ -2.22
RRN9P53437 SLI15YBR156C 2097 nt1.21□□□□□ -2.22
RRN9P53437 HMRA1YCR097W 381 nt1.21□□□□□ -2.22
RRN9P53437 PCC1YKR095W-A 267 nt1.21□□□□□ -2.22
RRN9P53437 YMR290W-AYMR290W-A 348 nt1.21□□□□□ -2.22
RRN9P53437 YOL160WYOL160W 342 nt1.21□□□□□ -2.22
RRN9P53437 snR14snR14 160 nt1.21□□□□□ -2.22
RRN9P53437 KAP122YGL016W 3246 nt1.21□□□□□ -2.22
RRN9P53437 RPS20YHL015W 366 nt1.2□□□□□ -2.22
RRN9P53437 YIL020C-AYIL020C-A 339 nt1.2□□□□□ -2.22
RRN9P53437 YBR012CYBR012C 420 nt1.2□□□□□ -2.22
RRN9P53437 SPT21YMR179W 2277 nt1.19□□□□□ -2.22
RRN9P53437 snR56snR56 88 nt1.19□□□□□ -2.22
RRN9P53437 tW(UCA)QtW(UCA)Q 74 nt1.19□□□□□ -2.22
RRN9P53437 RRT15YLR162W-A 189 nt1.19□□□□□ -2.22
RRN9P53437 YOR161W-BYOR161W-B 261 nt1.19□□□□□ -2.22
RRN9P53437 YSY6YBR162W-A 198 nt1.19□□□□□ -2.22
RRN9P53437 NUP192YJL039C 5052 nt1.19□□□□□ -2.22
RRN9P53437 PIP2YOR363C 2991 nt1.19□□□□□ -2.22
RRN9P53437 LCD1YDR499W 2244 nt1.19□□□□□ -2.22
RRN9P53437 FIG4YNL325C 2640 nt1.18□□□□□ -2.22
RRN9P53437 CSN9YDR179C 489 nt1.17□□□□□ -2.22
RRN9P53437 YHR175W-AYHR175W-A 150 nt1.17□□□□□ -2.22
RRN9P53437 YPR197CYPR197C 564 nt1.17□□□□□ -2.22
RRN9P53437 NUT1YGL151W 3399 nt1.17□□□□□ -2.22
RRN9P53437 NUP188YML103C 4968 nt1.17□□□□□ -2.22
RRN9P53437 COG4YPR105C 2586 nt1.16□□□□□ -2.22
RRN9P53437 YPR016W-AYPR016W-A 261 nt1.16□□□□□ -2.22
RRN9P53437 MMS4YBR098W 2076 nt1.16□□□□□ -2.22
RRN9P53437 PKH2YOL100W 3246 nt1.15□□□□□ -2.22
RRN9P53437 GIM4YEL003W 336 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)E1tH(GUG)E1 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)E2tH(GUG)E2 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)G1tH(GUG)G1 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)G2tH(GUG)G2 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)HtH(GUG)H 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)KtH(GUG)K 72 nt1.15□□□□□ -2.23
RRN9P53437 tH(GUG)MtH(GUG)M 72 nt1.15□□□□□ -2.23
RRN9P53437 YLL020CYLL020C 306 nt1.15□□□□□ -2.23
RRN9P53437 RPL33BYOR234C 324 nt1.15□□□□□ -2.23
RRN9P53437 YPR063CYPR063C 423 nt1.15□□□□□ -2.23
RRN9P53437 RAD34YDR314C 2079 nt1.15□□□□□ -2.23
RRN9P53437 NST1YNL091W 3723 nt1.15□□□□□ -2.23
RRN9P53437 CUL3YGR003W 2235 nt1.15□□□□□ -2.23
RRN9P53437 MAM33YIL070C 801 nt1.14□□□□□ -2.23
RRN9P53437 HTB2YBL002W 396 nt1.13□□□□□ -2.23
RRN9P53437 YPL038W-AYPL038W-A 192 nt1.13□□□□□ -2.23
RRN9P53437 SWI4YER111C 3282 nt1.13□□□□□ -2.23
RRN9P53437 RPL35AYDL191W 363 nt1.12□□□□□ -2.23
RRN9P53437 GPG1YGL121C 381 nt1.12□□□□□ -2.23
RRN9P53437 YIR044CYIR044C 186 nt1.12□□□□□ -2.23
RRN9P53437 SEC3YER008C 4011 nt1.11□□□□□ -2.23
RRN9P53437 SMC1YFL008W 3678 nt1.11□□□□□ -2.23
RRN9P53437 YAR029WYAR029W 225 nt1.11□□□□□ -2.23
RRN9P53437 APL3YBL037W 3078 nt1.11□□□□□ -2.23
RRN9P53437 YBR221W-AYBR221W-A 105 nt1.1□□□□□ -2.23
RRN9P53437 STO1YMR125W 2586 nt1.1□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 77.1 ms