Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144AP50876 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF144AP50876 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF144AP50876 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF144AP50876 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144AP50876 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF144AP50876 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 CROCCP5-201ENST00000436658 830 ntBASIC18.66■□□□□ 0.58
RNF144AP50876 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF144AP50876 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 AL356652.1-201ENST00000615962 565 ntBASIC18.66■□□□□ 0.58
RNF144AP50876 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 AC008694.1-202ENST00000636953 945 ntBASIC18.66■□□□□ 0.58
RNF144AP50876 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF144AP50876 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF144AP50876 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF144AP50876 AC087633.2-202ENST00000565166 1439 ntBASIC18.66■□□□□ 0.58
RNF144AP50876 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF144AP50876 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF144AP50876 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF144AP50876 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 AC069236.1-201ENST00000604339 616 ntBASIC18.65■□□□□ 0.58
RNF144AP50876 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF144AP50876 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
RNF144AP50876 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RNF144AP50876 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF144AP50876 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF144AP50876 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF144AP50876 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF144AP50876 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RNF144AP50876 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.64■□□□□ 0.58
RNF144AP50876 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF144AP50876 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF144AP50876 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF144AP50876 AL162377.1-201ENST00000618844 1793 ntBASIC18.64■□□□□ 0.57
RNF144AP50876 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 AC026185.1-201ENST00000445748 174 ntBASIC18.64■□□□□ 0.57
RNF144AP50876 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF144AP50876 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF144AP50876 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF144AP50876 RAP2CP1-201ENST00000605103 478 ntBASIC18.64■□□□□ 0.57
RNF144AP50876 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.64■□□□□ 0.57
RNF144AP50876 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF144AP50876 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
RNF144AP50876 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF144AP50876 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF144AP50876 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RNF144AP50876 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF144AP50876 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF144AP50876 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF144AP50876 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF144AP50876 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms