Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TUBP50607 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBP50607 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBP50607 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TUBP50607 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 AC128676.1-201ENST00000454392 318 ntBASIC21.17■□□□□ 0.98
TUBP50607 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.17■□□□□ 0.98
TUBP50607 AC008687.6-201ENST00000596318 630 ntBASIC21.17■□□□□ 0.98
TUBP50607 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TUBP50607 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.17■□□□□ 0.98
TUBP50607 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
TUBP50607 AC006128.1-201ENST00000624704 1661 ntBASIC21.17■□□□□ 0.98
TUBP50607 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBP50607 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBP50607 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBP50607 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBP50607 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBP50607 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.16■□□□□ 0.98
TUBP50607 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TUBP50607 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBP50607 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TUBP50607 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TUBP50607 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBP50607 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TUBP50607 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBP50607 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBP50607 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 SOX15-203ENST00000570788 1093 ntBASIC21.15■□□□□ 0.98
TUBP50607 AC073648.6-201ENST00000641589 218 ntBASIC21.15■□□□□ 0.98
TUBP50607 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBP50607 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBP50607 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBP50607 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TUBP50607 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.14■□□□□ 0.98
TUBP50607 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBP50607 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TUBP50607 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBP50607 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.14■□□□□ 0.97
TUBP50607 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.14■□□□□ 0.97
TUBP50607 AC005829.2-201ENST00000571422 1056 ntBASIC21.14■□□□□ 0.97
TUBP50607 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.14■□□□□ 0.97
TUBP50607 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TUBP50607 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
TUBP50607 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBP50607 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBP50607 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBP50607 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
TUBP50607 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBP50607 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBP50607 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TUBP50607 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.13■□□□□ 0.97
TUBP50607 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms