Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 COX8YLR395C 237 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 YBR206WYBR206W 324 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 CUL3YGR003W 2235 nt-0.49□□□□□ -2.49
TY1B-JR1P47098 MMS2YGL087C 414 nt-0.5□□□□□ -2.49
TY1B-JR1P47098 snR128snR128 126 nt-0.5□□□□□ -2.49
TY1B-JR1P47098 LSM4YER112W 564 nt-0.5□□□□□ -2.49
TY1B-JR1P47098 MAM33YIL070C 801 nt-0.5□□□□□ -2.49
TY1B-JR1P47098 BI3Q0115 1554 nt-0.51□□□□□ -2.49
TY1B-JR1P47098 YBR184WYBR184W 1572 nt-0.51□□□□□ -2.49
TY1B-JR1P47098 YEL073CYEL073C 324 nt-0.51□□□□□ -2.49
TY1B-JR1P47098 OLI1Q0130 231 nt-0.51□□□□□ -2.49
TY1B-JR1P47098 AI5_ALPHAQ0070 1893 nt-0.51□□□□□ -2.49
TY1B-JR1P47098 CMS1YLR003C 876 nt-0.52□□□□□ -2.49
TY1B-JR1P47098 BSC3YLR465C 309 nt-0.52□□□□□ -2.49
TY1B-JR1P47098 YNR077CYNR077C 255 nt-0.52□□□□□ -2.49
TY1B-JR1P47098 COX5BYIL111W 456 nt-0.53□□□□□ -2.49
TY1B-JR1P47098 YDL152WYDL152W 366 nt-0.54□□□□□ -2.5
TY1B-JR1P47098 snR33snR33 183 nt-0.54□□□□□ -2.5
TY1B-JR1P47098 RFX1YLR176C 2436 nt-0.54□□□□□ -2.5
TY1B-JR1P47098 RPS7BYNL096C 573 nt-0.55□□□□□ -2.5
TY1B-JR1P47098 YGL042CYGL042C 306 nt-0.55□□□□□ -2.5
TY1B-JR1P47098 YPL044CYPL044C 549 nt-0.55□□□□□ -2.5
TY1B-JR1P47098 TDA2YER071C 381 nt-0.56□□□□□ -2.5
TY1B-JR1P47098 YBR064WYBR064W 429 nt-0.56□□□□□ -2.5
TY1B-JR1P47098 YCR038W-AYCR038W-A 126 nt-0.57□□□□□ -2.5
TY1B-JR1P47098 YDR371C-AYDR371C-A 105 nt-0.57□□□□□ -2.5
TY1B-JR1P47098 THG1YGR024C 714 nt-0.57□□□□□ -2.5
TY1B-JR1P47098 YPL185WYPL185W 396 nt-0.57□□□□□ -2.5
TY1B-JR1P47098 BI4Q0120 1917 nt-0.58□□□□□ -2.5
TY1B-JR1P47098 YER038W-AYER038W-A 381 nt-0.58□□□□□ -2.5
TY1B-JR1P47098 YDR290WYDR290W 330 nt-0.59□□□□□ -2.5
TY1B-JR1P47098 ATP20YPR020W 348 nt-0.59□□□□□ -2.5
TY1B-JR1P47098 HTB1YDR224C 396 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 MMS21YEL019C 804 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 RPL29YFR032C-A 180 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 ECM9YKR004C 1134 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 YMR158C-AYMR158C-A 138 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 CDC33YOL139C 642 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 YPR099CYPR099C 357 nt-0.6□□□□□ -2.5
TY1B-JR1P47098 YKU70YMR284W 1809 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 ASE1YOR058C 2658 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 NIP1YMR309C 2439 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 DAD1YDR016C 285 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 snR24snR24 89 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 YBR223W-AYBR223W-A 120 nt-0.6□□□□□ -2.51
TY1B-JR1P47098 AI5_BETAQ0075 1065 nt-0.61□□□□□ -2.51
TY1B-JR1P47098 YLR271WYLR271W 825 nt-0.61□□□□□ -2.51
TY1B-JR1P47098 GSP1YLR293C 660 nt-0.61□□□□□ -2.51
TY1B-JR1P47098 ERV15YBR210W 429 nt-0.62□□□□□ -2.51
TY1B-JR1P47098 RSM18YER050C 417 nt-0.62□□□□□ -2.51
TY1B-JR1P47098 RPS26AYGL189C 360 nt-0.62□□□□□ -2.51
TY1B-JR1P47098 YJL120WYJL120W 324 nt-0.62□□□□□ -2.51
TY1B-JR1P47098 YAL067W-AYAL067W-A 228 nt-0.63□□□□□ -2.51
TY1B-JR1P47098 YLL032CYLL032C 2478 nt-0.63□□□□□ -2.51
TY1B-JR1P47098 YDR008CYDR008C 351 nt-0.64□□□□□ -2.51
TY1B-JR1P47098 SUS1YBR111W-A 291 nt-0.64□□□□□ -2.51
TY1B-JR1P47098 YGL204CYGL204C 306 nt-0.65□□□□□ -2.51
TY1B-JR1P47098 PET20YPL159C 762 nt-0.65□□□□□ -2.51
TY1B-JR1P47098 RUB1YDR139C 234 nt-0.65□□□□□ -2.51
TY1B-JR1P47098 YOL118CYOL118C 309 nt-0.66□□□□□ -2.52
TY1B-JR1P47098 YDR344CYDR344C 444 nt-0.67□□□□□ -2.52
TY1B-JR1P47098 RUF20RUF20 443 nt-0.67□□□□□ -2.52
TY1B-JR1P47098 YNL171CYNL171C 369 nt-0.67□□□□□ -2.52
TY1B-JR1P47098 YPL205CYPL205C 345 nt-0.67□□□□□ -2.52
TY1B-JR1P47098 YPR160W-AYPR160W-A 81 nt-0.67□□□□□ -2.52
TY1B-JR1P47098 TIM13YGR181W 318 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 PFS1YHR185C 714 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 YJR079WYJR079W 330 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 NFU1YKL040C 771 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 YLR146W-AYLR146W-A 189 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 YNL146WYNL146W 303 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 MCM10YIL150C 1716 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 VPS63YLR261C 327 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 RPS10BYMR230W 318 nt-0.68□□□□□ -2.52
TY1B-JR1P47098 SEM1YDR363W-A 270 nt-0.69□□□□□ -2.52
TY1B-JR1P47098 YLR399W-AYLR399W-A 105 nt-0.69□□□□□ -2.52
TY1B-JR1P47098 YNL067W-BYNL067W-B 141 nt-0.69□□□□□ -2.52
TY1B-JR1P47098 snR79snR79 84 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 OST4YDL232W 111 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 YMR141W-AYMR141W-A 225 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 YMR153C-AYMR153C-A 336 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 YKL023C-AYKL023C-A 228 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 YOL160WYOL160W 342 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 TFB6YOR352W 1032 nt-0.7□□□□□ -2.52
TY1B-JR1P47098 LSO2YGR169C-A 279 nt-0.71□□□□□ -2.52
TY1B-JR1P47098 GIM5YML094W 492 nt-0.71□□□□□ -2.52
TY1B-JR1P47098 YMR290W-AYMR290W-A 348 nt-0.71□□□□□ -2.52
TY1B-JR1P47098 COY1YKL179C 2040 nt-0.71□□□□□ -2.52
TY1B-JR1P47098 RMD6YEL072W 696 nt-0.72□□□□□ -2.52
TY1B-JR1P47098 DIE2YGR227W 1578 nt-0.73□□□□□ -2.53
TY1B-JR1P47098 PTP2YOR208W 2253 nt-0.73□□□□□ -2.53
TY1B-JR1P47098 UBS1YBR165W 834 nt-0.73□□□□□ -2.53
TY1B-JR1P47098 YCR022CYCR022C 345 nt-0.74□□□□□ -2.53
TY1B-JR1P47098 snR44snR44 211 nt-0.74□□□□□ -2.53
TY1B-JR1P47098 PAN3YKL025C 2040 nt-0.75□□□□□ -2.53
TY1B-JR1P47098 DFG10YIL049W 762 nt-0.75□□□□□ -2.53
TY1B-JR1P47098 snR36snR36 182 nt-0.75□□□□□ -2.53
TY1B-JR1P47098 ZIP2YGL249W 2115 nt-0.76□□□□□ -2.53
TY1B-JR1P47098 RSM23YGL129C 1353 nt-0.76□□□□□ -2.53
TY1B-JR1P47098 MRPL31YKL138C 396 nt-0.76□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms