Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 DPP3P2-201ENST00000416030 1696 ntBASIC22.24■■□□□ 1.15
RFC5P40937 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC5P40937 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
RFC5P40937 RN7SL471P-201ENST00000580476 299 ntBASIC22.24■■□□□ 1.15
RFC5P40937 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC5P40937 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC5P40937 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFC5P40937 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
RFC5P40937 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.23■■□□□ 1.15
RFC5P40937 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.23■■□□□ 1.15
RFC5P40937 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.23■■□□□ 1.15
RFC5P40937 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.23■■□□□ 1.15
RFC5P40937 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
RFC5P40937 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RFC5P40937 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC5P40937 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RFC5P40937 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.23■■□□□ 1.15
RFC5P40937 KRT8P17-201ENST00000453110 1448 ntBASIC22.23■■□□□ 1.15
RFC5P40937 AL137060.1-201ENST00000618151 2648 ntBASIC22.22■■□□□ 1.15
RFC5P40937 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFC5P40937 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFC5P40937 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFC5P40937 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.22■■□□□ 1.15
RFC5P40937 AC142381.4-202ENST00000563973 229 ntBASIC22.22■■□□□ 1.15
RFC5P40937 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.22■■□□□ 1.15
RFC5P40937 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.22■■□□□ 1.15
RFC5P40937 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RFC5P40937 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.22■■□□□ 1.15
RFC5P40937 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.22■■□□□ 1.15
RFC5P40937 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.22■■□□□ 1.15
RFC5P40937 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RFC5P40937 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.22■■□□□ 1.15
RFC5P40937 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFC5P40937 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 RPS2P52-201ENST00000469610 820 ntBASIC22.21■■□□□ 1.15
RFC5P40937 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RFC5P40937 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.21■■□□□ 1.15
RFC5P40937 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.21■■□□□ 1.15
RFC5P40937 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
RFC5P40937 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.21■■□□□ 1.15
RFC5P40937 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RFC5P40937 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RFC5P40937 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.2■■□□□ 1.15
RFC5P40937 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
RFC5P40937 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
RFC5P40937 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
RFC5P40937 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.2■■□□□ 1.14
RFC5P40937 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RFC5P40937 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
RFC5P40937 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.2■■□□□ 1.14
RFC5P40937 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.2■■□□□ 1.14
RFC5P40937 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.2■■□□□ 1.14
RFC5P40937 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.2■■□□□ 1.14
RFC5P40937 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.2■■□□□ 1.14
RFC5P40937 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RFC5P40937 MTDHP1-201ENST00000605323 784 ntBASIC22.2■■□□□ 1.14
RFC5P40937 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.2■■□□□ 1.14
RFC5P40937 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFC5P40937 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.19■■□□□ 1.14
RFC5P40937 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.19■■□□□ 1.14
RFC5P40937 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RFC5P40937 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
RFC5P40937 AL158047.1-201ENST00000445918 881 ntBASIC22.19■■□□□ 1.14
RFC5P40937 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms