Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 PIG1YLR273C 1947 nt1.81□□□□□ -2.12
SSM4P40318 tW(UCA)QtW(UCA)Q 74 nt1.81□□□□□ -2.12
SSM4P40318 SAR1YPL218W 573 nt1.81□□□□□ -2.12
SSM4P40318 PIK1YNL267W 3201 nt1.8□□□□□ -2.12
SSM4P40318 SRP14YDL092W 441 nt1.8□□□□□ -2.12
SSM4P40318 APL2YKL135C 2181 nt1.8□□□□□ -2.12
SSM4P40318 snR51snR51 107 nt1.8□□□□□ -2.12
SSM4P40318 YLR419WYLR419W 4308 nt1.8□□□□□ -2.12
SSM4P40318 SPC98YNL126W 2541 nt1.79□□□□□ -2.12
SSM4P40318 PET127YOR017W 2403 nt1.79□□□□□ -2.12
SSM4P40318 EMC5YIL027C 426 nt1.79□□□□□ -2.12
SSM4P40318 KAP122YGL016W 3246 nt1.79□□□□□ -2.12
SSM4P40318 YGR109W-BYGR109W-B 4644 nt1.79□□□□□ -2.12
SSM4P40318 Q0142Q0142 177 nt1.78□□□□□ -2.12
SSM4P40318 NUT1YGL151W 3399 nt1.78□□□□□ -2.12
SSM4P40318 RIM20YOR275C 1986 nt1.78□□□□□ -2.13
SSM4P40318 MON2YNL297C 4911 nt1.77□□□□□ -2.13
SSM4P40318 CSN9YDR179C 489 nt1.77□□□□□ -2.13
SSM4P40318 PAU2YEL049W 363 nt1.77□□□□□ -2.13
SSM4P40318 YML007C-AYML007C-A 111 nt1.77□□□□□ -2.13
SSM4P40318 AHC1YOR023C 1701 nt1.76□□□□□ -2.13
SSM4P40318 YDL240C-AYDL240C-A 138 nt1.76□□□□□ -2.13
SSM4P40318 YDR182W-AYDR182W-A 204 nt1.76□□□□□ -2.13
SSM4P40318 YDR524W-CYDR524W-C 90 nt1.76□□□□□ -2.13
SSM4P40318 RPL40BYKR094C 387 nt1.76□□□□□ -2.13
SSM4P40318 INP2YMR163C 2118 nt1.76□□□□□ -2.13
SSM4P40318 YMR230W-AYMR230W-A 189 nt1.76□□□□□ -2.13
SSM4P40318 SAS3YBL052C 2496 nt1.76□□□□□ -2.13
SSM4P40318 BEM2YER155C 6504 nt1.76□□□□□ -2.13
SSM4P40318 ALK1YGL021W 2283 nt1.74□□□□□ -2.13
SSM4P40318 YHR007C-AYHR007C-A 216 nt1.74□□□□□ -2.13
SSM4P40318 tT(UGU)HtT(UGU)H 72 nt1.74□□□□□ -2.13
SSM4P40318 YJL022WYJL022W 309 nt1.74□□□□□ -2.13
SSM4P40318 RPB10YOR210W 213 nt1.74□□□□□ -2.13
SSM4P40318 RPL33BYOR234C 324 nt1.74□□□□□ -2.13
SSM4P40318 SPO24YPR036W-A 204 nt1.74□□□□□ -2.13
SSM4P40318 YMR242W-AYMR242W-A 90 nt1.73□□□□□ -2.13
SSM4P40318 YOR199WYOR199W 330 nt1.73□□□□□ -2.13
SSM4P40318 TIM18YOR297C 579 nt1.73□□□□□ -2.13
SSM4P40318 YPL038W-AYPL038W-A 192 nt1.73□□□□□ -2.13
SSM4P40318 YPR002C-AYPR002C-A 198 nt1.73□□□□□ -2.13
SSM4P40318 YOR019WYOR019W 2193 nt1.73□□□□□ -2.13
SSM4P40318 VPS55YJR044C 423 nt1.72□□□□□ -2.13
SSM4P40318 COF1YLL050C 432 nt1.72□□□□□ -2.13
SSM4P40318 YAF9YNL107W 681 nt1.72□□□□□ -2.13
SSM4P40318 YOL160WYOL160W 342 nt1.72□□□□□ -2.13
SSM4P40318 PMD1YER132C 5262 nt1.72□□□□□ -2.13
SSM4P40318 YLR422WYLR422W 5799 nt1.72□□□□□ -2.13
SSM4P40318 FYV8YGR196C 2454 nt1.72□□□□□ -2.13
SSM4P40318 NIP100YPL174C 2607 nt1.72□□□□□ -2.13
SSM4P40318 UFD2YDL190C 2886 nt1.72□□□□□ -2.13
SSM4P40318 snR72snR72 98 nt1.71□□□□□ -2.14
SSM4P40318 RPL35AYDL191W 363 nt1.71□□□□□ -2.14
SSM4P40318 YDR102CYDR102C 333 nt1.71□□□□□ -2.14
SSM4P40318 ZIP2YGL249W 2115 nt1.7□□□□□ -2.14
SSM4P40318 PCC1YKR095W-A 267 nt1.7□□□□□ -2.14
SSM4P40318 YOR108C-AYOR108C-A 210 nt1.7□□□□□ -2.14
SSM4P40318 NCA2YPR155C 1851 nt1.7□□□□□ -2.14
SSM4P40318 BST1YFL025C 3090 nt1.7□□□□□ -2.14
SSM4P40318 YDR426CYDR426C 378 nt1.69□□□□□ -2.14
SSM4P40318 YMR175W-AYMR175W-A 195 nt1.69□□□□□ -2.14
SSM4P40318 HTB2YBL002W 396 nt1.68□□□□□ -2.14
SSM4P40318 NOC3YLR002C 1992 nt1.68□□□□□ -2.14
SSM4P40318 AI5_ALPHAQ0070 1893 nt1.68□□□□□ -2.14
SSM4P40318 YJL135WYJL135W 318 nt1.67□□□□□ -2.14
SSM4P40318 SDH2YLL041C 801 nt1.67□□□□□ -2.14
SSM4P40318 MAD1YGL086W 2250 nt1.67□□□□□ -2.14
SSM4P40318 NPC2YDL046W 522 nt1.66□□□□□ -2.14
SSM4P40318 TAR1YLR154W-C 375 nt1.66□□□□□ -2.14
SSM4P40318 SIP4YJL089W 2490 nt1.66□□□□□ -2.14
SSM4P40318 YGL217CYGL217C 342 nt1.66□□□□□ -2.14
SSM4P40318 YLR140WYLR140W 327 nt1.66□□□□□ -2.14
SSM4P40318 YMR290W-AYMR290W-A 348 nt1.66□□□□□ -2.14
SSM4P40318 YOR376WYOR376W 369 nt1.66□□□□□ -2.14
SSM4P40318 YPL225WYPL225W 441 nt1.66□□□□□ -2.14
SSM4P40318 ALY2YJL084C 3141 nt1.65□□□□□ -2.14
SSM4P40318 RAD34YDR314C 2079 nt1.65□□□□□ -2.15
SSM4P40318 COG4YPR105C 2586 nt1.65□□□□□ -2.15
SSM4P40318 SPO75YLL005C 2607 nt1.65□□□□□ -2.15
SSM4P40318 RAD50YNL250W 3939 nt1.64□□□□□ -2.15
SSM4P40318 VPS54YDR027C 2670 nt1.64□□□□□ -2.15
SSM4P40318 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
SSM4P40318 YDR169C-AYDR169C-A 150 nt1.64□□□□□ -2.15
SSM4P40318 SLX4YLR135W 2247 nt1.63□□□□□ -2.15
SSM4P40318 YOR161W-BYOR161W-B 261 nt1.63□□□□□ -2.15
SSM4P40318 YSY6YBR162W-A 198 nt1.63□□□□□ -2.15
SSM4P40318 MSN5YDR335W 3675 nt1.62□□□□□ -2.15
SSM4P40318 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
SSM4P40318 YDR183C-AYDR183C-A 258 nt1.62□□□□□ -2.15
SSM4P40318 SCW11YGL028C 1629 nt1.62□□□□□ -2.15
SSM4P40318 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
SSM4P40318 CLU1YMR012W 3834 nt1.61□□□□□ -2.15
SSM4P40318 EST2YLR318W 2655 nt1.61□□□□□ -2.15
SSM4P40318 ROM2YLR371W 4071 nt1.61□□□□□ -2.15
SSM4P40318 PAU12YGR294W 363 nt1.61□□□□□ -2.15
SSM4P40318 YKL118WYKL118W 312 nt1.61□□□□□ -2.15
SSM4P40318 PAU24YBR301W 363 nt1.61□□□□□ -2.15
SSM4P40318 SEC5YDR166C 2916 nt1.61□□□□□ -2.15
SSM4P40318 DOP1YDR141C 5097 nt1.6□□□□□ -2.15
SSM4P40318 MAM33YIL070C 801 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms