Protein–RNA interactions for Protein: P40080

VFA1, VPS4-associated protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VFA1P40080 snR60snR60 104 nt1.92□□□□□ -2.1
VFA1P40080 SRP14YDL092W 441 nt1.92□□□□□ -2.1
VFA1P40080 YDL211CYDL211C 1119 nt1.92□□□□□ -2.1
VFA1P40080 YEL020C-BYEL020C-B 198 nt1.92□□□□□ -2.1
VFA1P40080 MLH3YPL164C 2148 nt1.92□□□□□ -2.1
VFA1P40080 LCD1YDR499W 2244 nt1.92□□□□□ -2.1
VFA1P40080 SEY1YOR165W 2331 nt1.92□□□□□ -2.1
VFA1P40080 PDR8YLR266C 2106 nt1.91□□□□□ -2.1
VFA1P40080 HMI1YOL095C 2121 nt1.91□□□□□ -2.1
VFA1P40080 SEC63YOR254C 1992 nt1.91□□□□□ -2.1
VFA1P40080 SAS3YBL052C 2496 nt1.91□□□□□ -2.1
VFA1P40080 RGA1YOR127W 3024 nt1.9□□□□□ -2.11
VFA1P40080 SSS1YDR086C 243 nt1.9□□□□□ -2.11
VFA1P40080 SDH2YLL041C 801 nt1.9□□□□□ -2.11
VFA1P40080 APL2YKL135C 2181 nt1.9□□□□□ -2.11
VFA1P40080 SPC98YNL126W 2541 nt1.9□□□□□ -2.11
VFA1P40080 YMR045CYMR045C 5268 nt1.89□□□□□ -2.11
VFA1P40080 MPT5YGL178W 2580 nt1.89□□□□□ -2.11
VFA1P40080 YMR242W-AYMR242W-A 90 nt1.89□□□□□ -2.11
VFA1P40080 ZIP2YGL249W 2115 nt1.88□□□□□ -2.11
VFA1P40080 MSH6YDR097C 3729 nt1.88□□□□□ -2.11
VFA1P40080 YDR182W-AYDR182W-A 204 nt1.88□□□□□ -2.11
VFA1P40080 ELG1YOR144C 2376 nt1.88□□□□□ -2.11
VFA1P40080 SPT21YMR179W 2277 nt1.88□□□□□ -2.11
VFA1P40080 DGR2YKL121W 2559 nt1.88□□□□□ -2.11
VFA1P40080 PIG1YLR273C 1947 nt1.87□□□□□ -2.11
VFA1P40080 YOR108C-AYOR108C-A 210 nt1.87□□□□□ -2.11
VFA1P40080 INA22YIR024C 651 nt1.86□□□□□ -2.11
VFA1P40080 MGA2YIR033W 3342 nt1.86□□□□□ -2.11
VFA1P40080 CFT1YDR301W 4074 nt1.86□□□□□ -2.11
VFA1P40080 GCN2YDR283C 4980 nt1.86□□□□□ -2.11
VFA1P40080 FRK1YPL141C 2598 nt1.86□□□□□ -2.11
VFA1P40080 VIK1YPL253C 1944 nt1.85□□□□□ -2.11
VFA1P40080 YGL188C-AYGL188C-A 141 nt1.85□□□□□ -2.11
VFA1P40080 CSE2YNR010W 450 nt1.85□□□□□ -2.11
VFA1P40080 snR49snR49 165 nt1.85□□□□□ -2.11
VFA1P40080 RAD34YDR314C 2079 nt1.85□□□□□ -2.11
VFA1P40080 MAD1YGL086W 2250 nt1.85□□□□□ -2.11
VFA1P40080 YNL028WYNL028W 318 nt1.84□□□□□ -2.11
VFA1P40080 YCK3YER123W 1575 nt1.84□□□□□ -2.12
VFA1P40080 YNL144CYNL144C 2223 nt1.83□□□□□ -2.12
VFA1P40080 TBS1YBR150C 3285 nt1.83□□□□□ -2.12
VFA1P40080 MYO4YAL029C 4416 nt1.83□□□□□ -2.12
VFA1P40080 YBR064WYBR064W 429 nt1.83□□□□□ -2.12
VFA1P40080 YJR039WYJR039W 3366 nt1.83□□□□□ -2.12
VFA1P40080 HSL1YKL101W 4557 nt1.83□□□□□ -2.12
VFA1P40080 UBR2YLR024C 5619 nt1.82□□□□□ -2.12
VFA1P40080 PAU2YEL049W 363 nt1.82□□□□□ -2.12
VFA1P40080 SFB2YNL049C 2631 nt1.81□□□□□ -2.12
VFA1P40080 YLR120W-AYLR120W-A 102 nt1.81□□□□□ -2.12
VFA1P40080 YMR172C-AYMR172C-A 384 nt1.81□□□□□ -2.12
VFA1P40080 SPO75YLL005C 2607 nt1.81□□□□□ -2.12
VFA1P40080 UTP21YLR409C 2820 nt1.81□□□□□ -2.12
VFA1P40080 RPL34BYIL052C 366 nt1.8□□□□□ -2.12
VFA1P40080 YOR015WYOR015W 360 nt1.8□□□□□ -2.12
VFA1P40080 AI5_ALPHAQ0070 1893 nt1.8□□□□□ -2.12
VFA1P40080 NOC3YLR002C 1992 nt1.79□□□□□ -2.12
VFA1P40080 snR80snR80 171 nt1.79□□□□□ -2.12
VFA1P40080 YJL197C-AYJL197C-A 282 nt1.79□□□□□ -2.12
VFA1P40080 YGL052WYGL052W 306 nt1.78□□□□□ -2.12
VFA1P40080 YIR044CYIR044C 186 nt1.78□□□□□ -2.12
VFA1P40080 YMR175W-AYMR175W-A 195 nt1.78□□□□□ -2.12
VFA1P40080 VPS54YDR027C 2670 nt1.78□□□□□ -2.12
VFA1P40080 LRE1YCL051W 1752 nt1.77□□□□□ -2.13
VFA1P40080 PDE2YOR360C 1581 nt1.77□□□□□ -2.13
VFA1P40080 YHR214C-BYHR214C-B 5382 nt1.77□□□□□ -2.13
VFA1P40080 TMA7YLR262C-A 195 nt1.77□□□□□ -2.13
VFA1P40080 ABF2YMR072W 552 nt1.77□□□□□ -2.13
VFA1P40080 YOL155W-AYOL155W-A 135 nt1.77□□□□□ -2.13
VFA1P40080 SPG3YDR504C 384 nt1.76□□□□□ -2.13
VFA1P40080 YMR321CYMR321C 318 nt1.76□□□□□ -2.13
VFA1P40080 LHS1YKL073W 2646 nt1.76□□□□□ -2.13
VFA1P40080 BRR2YER172C 6492 nt1.76□□□□□ -2.13
VFA1P40080 KCS1YDR017C 3153 nt1.75□□□□□ -2.13
VFA1P40080 SKI3YPR189W 4299 nt1.75□□□□□ -2.13
VFA1P40080 YGL041CYGL041C 204 nt1.75□□□□□ -2.13
VFA1P40080 EMC5YIL027C 426 nt1.75□□□□□ -2.13
VFA1P40080 YJL120WYJL120W 324 nt1.75□□□□□ -2.13
VFA1P40080 IES4YOR189W 351 nt1.75□□□□□ -2.13
VFA1P40080 KIP1YBL063W 3336 nt1.74□□□□□ -2.13
VFA1P40080 RPL31AYDL075W 342 nt1.74□□□□□ -2.13
VFA1P40080 RPS27BYHR021C 249 nt1.74□□□□□ -2.13
VFA1P40080 ANS1YHR126C 480 nt1.74□□□□□ -2.13
VFA1P40080 RPS25BYLR333C 327 nt1.74□□□□□ -2.13
VFA1P40080 SPO24YPR036W-A 204 nt1.74□□□□□ -2.13
VFA1P40080 NUT1YGL151W 3399 nt1.74□□□□□ -2.13
VFA1P40080 SPO21YOL091W 1830 nt1.73□□□□□ -2.13
VFA1P40080 snR55snR55 98 nt1.73□□□□□ -2.13
VFA1P40080 CDC36YDL165W 576 nt1.73□□□□□ -2.13
VFA1P40080 COA6YMR244C-A 315 nt1.73□□□□□ -2.13
VFA1P40080 YOR011W-AYOR011W-A 207 nt1.73□□□□□ -2.13
VFA1P40080 CUL3YGR003W 2235 nt1.72□□□□□ -2.13
VFA1P40080 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
VFA1P40080 PAU3YCR104W 375 nt1.72□□□□□ -2.13
VFA1P40080 YBL008W-AYBL008W-A 240 nt1.72□□□□□ -2.13
VFA1P40080 YOR218CYOR218C 420 nt1.72□□□□□ -2.13
VFA1P40080 IRC20YLR247C 4671 nt1.72□□□□□ -2.13
VFA1P40080 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
VFA1P40080 PTP2YOR208W 2253 nt1.71□□□□□ -2.13
VFA1P40080 BPH1YCR032W 6504 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 41.7 ms