Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YOL014WYOL014W 375 nt-0.22□□□□□ -2.44
RPB11P38902 CSM4YPL200W 471 nt-0.22□□□□□ -2.44
RPB11P38902 snR45snR45 172 nt-0.22□□□□□ -2.44
RPB11P38902 SSS1YDR086C 243 nt-0.23□□□□□ -2.45
RPB11P38902 YHR054CYHR054C 1065 nt-0.23□□□□□ -2.45
RPB11P38902 ACF4YJR083C 930 nt-0.23□□□□□ -2.45
RPB11P38902 RPL22BYFL034C-A 369 nt-0.24□□□□□ -2.45
RPB11P38902 YHR050W-AYHR050W-A 171 nt-0.24□□□□□ -2.45
RPB11P38902 YLR146W-AYLR146W-A 189 nt-0.24□□□□□ -2.45
RPB11P38902 TFB6YOR352W 1032 nt-0.24□□□□□ -2.45
RPB11P38902 TDA2YER071C 381 nt-0.25□□□□□ -2.45
RPB11P38902 YKL111CYKL111C 336 nt-0.25□□□□□ -2.45
RPB11P38902 YPL044CYPL044C 549 nt-0.25□□□□□ -2.45
RPB11P38902 RRI2YOL117W 1938 nt-0.26□□□□□ -2.45
RPB11P38902 YER076W-AYER076W-A 348 nt-0.26□□□□□ -2.45
RPB11P38902 RPS27AYKL156W 249 nt-0.26□□□□□ -2.45
RPB11P38902 LRP1YHR081W 555 nt-0.27□□□□□ -2.45
RPB11P38902 YMR304C-AYMR304C-A 351 nt-0.27□□□□□ -2.45
RPB11P38902 YPL197CYPL197C 414 nt-0.27□□□□□ -2.45
RPB11P38902 RCO1YMR075W 2055 nt-0.28□□□□□ -2.45
RPB11P38902 YEL018C-AYEL018C-A 534 nt-0.28□□□□□ -2.45
RPB11P38902 LOC1YFR001W 615 nt-0.28□□□□□ -2.45
RPB11P38902 YIR018C-AYIR018C-A 138 nt-0.28□□□□□ -2.45
RPB11P38902 CUL3YGR003W 2235 nt-0.28□□□□□ -2.45
RPB11P38902 INP2YMR163C 2118 nt-0.28□□□□□ -2.45
RPB11P38902 RFX1YLR176C 2436 nt-0.28□□□□□ -2.45
RPB11P38902 BI4Q0120 1917 nt-0.28□□□□□ -2.46
RPB11P38902 LIN1YHR156C 1023 nt-0.29□□□□□ -2.46
RPB11P38902 COX3Q0275 810 nt-0.29□□□□□ -2.46
RPB11P38902 YMR075C-AYMR075C-A 366 nt-0.29□□□□□ -2.46
RPB11P38902 IPI3YNL182C 1668 nt-0.3□□□□□ -2.46
RPB11P38902 SRB7YDR308C 423 nt-0.3□□□□□ -2.46
RPB11P38902 ULI1YFR026C 510 nt-0.3□□□□□ -2.46
RPB11P38902 TIM10YHR005C-A 282 nt-0.3□□□□□ -2.46
RPB11P38902 YJR079WYJR079W 330 nt-0.3□□□□□ -2.46
RPB11P38902 YER138W-AYER138W-A 105 nt-0.31□□□□□ -2.46
RPB11P38902 RPB10YOR210W 213 nt-0.31□□□□□ -2.46
RPB11P38902 YCL002CYCL002C 792 nt-0.31□□□□□ -2.46
RPB11P38902 ZIP2YGL249W 2115 nt-0.31□□□□□ -2.46
RPB11P38902 ORC3YLL004W 1851 nt-0.31□□□□□ -2.46
RPB11P38902 SLX9YGR081C 633 nt-0.33□□□□□ -2.46
RPB11P38902 PHS1YJL097W 654 nt-0.33□□□□□ -2.46
RPB11P38902 YDR029WYDR029W 315 nt-0.34□□□□□ -2.46
RPB11P38902 SDS22YKL193C 1017 nt-0.34□□□□□ -2.46
RPB11P38902 YDR220CYDR220C 294 nt-0.35□□□□□ -2.47
RPB11P38902 YNL150WYNL150W 408 nt-0.35□□□□□ -2.47
RPB11P38902 HTB1YDR224C 396 nt-0.36□□□□□ -2.47
RPB11P38902 YGR270C-AYGR270C-A 219 nt-0.36□□□□□ -2.47
RPB11P38902 YAR053WYAR053W 297 nt-0.36□□□□□ -2.47
RPB11P38902 YOR186C-AYOR186C-A 210 nt-0.36□□□□□ -2.47
RPB11P38902 OST4YDL232W 111 nt-0.37□□□□□ -2.47
RPB11P38902 YDR371C-AYDR371C-A 105 nt-0.37□□□□□ -2.47
RPB11P38902 QCR9YGR183C 201 nt-0.37□□□□□ -2.47
RPB11P38902 PRP21YJL203W 843 nt-0.38□□□□□ -2.47
RPB11P38902 POL32YJR043C 1053 nt-0.38□□□□□ -2.47
RPB11P38902 YNL050CYNL050C 813 nt-0.38□□□□□ -2.47
RPB11P38902 MCM10YIL150C 1716 nt-0.38□□□□□ -2.47
RPB11P38902 YMR013C-AYMR013C-A 150 nt-0.39□□□□□ -2.47
RPB11P38902 YMR290W-AYMR290W-A 348 nt-0.39□□□□□ -2.47
RPB11P38902 YNL146C-AYNL146C-A 195 nt-0.39□□□□□ -2.47
RPB11P38902 YER188C-AYER188C-A 300 nt-0.4□□□□□ -2.47
RPB11P38902 COX5BYIL111W 456 nt-0.4□□□□□ -2.47
RPB11P38902 YJL135WYJL135W 318 nt-0.4□□□□□ -2.47
RPB11P38902 AFB1YLR040C 675 nt-0.4□□□□□ -2.47
RPB11P38902 YLR271WYLR271W 825 nt-0.4□□□□□ -2.47
RPB11P38902 YOR032W-AYOR032W-A 201 nt-0.4□□□□□ -2.47
RPB11P38902 LEE1YPL054W 906 nt-0.4□□□□□ -2.47
RPB11P38902 YDR269CYDR269C 324 nt-0.41□□□□□ -2.48
RPB11P38902 YBR064WYBR064W 429 nt-0.41□□□□□ -2.48
RPB11P38902 THO2YNL139C 4794 nt-0.42□□□□□ -2.48
RPB11P38902 OLI1Q0130 231 nt-0.42□□□□□ -2.48
RPB11P38902 RPS26AYGL189C 360 nt-0.42□□□□□ -2.48
RPB11P38902 YLR198CYLR198C 360 nt-0.42□□□□□ -2.48
RPB11P38902 YPL185WYPL185W 396 nt-0.42□□□□□ -2.48
RPB11P38902 YPR160W-AYPR160W-A 81 nt-0.42□□□□□ -2.48
RPB11P38902 CWC23YGL128C 852 nt-0.43□□□□□ -2.48
RPB11P38902 ASE1YOR058C 2658 nt-0.44□□□□□ -2.48
RPB11P38902 RSM23YGL129C 1353 nt-0.45□□□□□ -2.48
RPB11P38902 NFU1YKL040C 771 nt-0.45□□□□□ -2.48
RPB11P38902 YKL136WYKL136W 399 nt-0.45□□□□□ -2.48
RPB11P38902 YMR141W-AYMR141W-A 225 nt-0.45□□□□□ -2.48
RPB11P38902 YMR321CYMR321C 318 nt-0.46□□□□□ -2.48
RPB11P38902 YNL146WYNL146W 303 nt-0.46□□□□□ -2.48
RPB11P38902 YDL187CYDL187C 330 nt-0.47□□□□□ -2.48
RPB11P38902 YFR012W-AYFR012W-A 87 nt-0.47□□□□□ -2.48
RPB11P38902 MAM33YIL070C 801 nt-0.47□□□□□ -2.48
RPB11P38902 VAM3YOR106W 852 nt-0.47□□□□□ -2.48
RPB11P38902 EFR3YMR212C 2349 nt-0.47□□□□□ -2.48
RPB11P38902 SOV1YMR066W 2697 nt-0.47□□□□□ -2.48
RPB11P38902 HAL9YOL089C 3093 nt-0.47□□□□□ -2.49
RPB11P38902 snR8snR8 190 nt-0.48□□□□□ -2.49
RPB11P38902 YAL067W-AYAL067W-A 228 nt-0.48□□□□□ -2.49
RPB11P38902 YGL015CYGL015C 393 nt-0.49□□□□□ -2.49
RPB11P38902 YOR248WYOR248W 303 nt-0.49□□□□□ -2.49
RPB11P38902 PAA1YDR071C 576 nt-0.5□□□□□ -2.49
RPB11P38902 TFB5YDR079C-A 219 nt-0.5□□□□□ -2.49
RPB11P38902 YDR210WYDR210W 228 nt-0.5□□□□□ -2.49
RPB11P38902 YBR076C-AYBR076C-A 267 nt-0.5□□□□□ -2.49
RPB11P38902 YAP6YDR259C 1152 nt-0.51□□□□□ -2.49
RPB11P38902 YKL068W-AYKL068W-A 237 nt-0.51□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 62.7 ms