Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
KRT9P35527 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT9P35527 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT9P35527 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
KRT9P35527 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT9P35527 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT9P35527 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
KRT9P35527 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT9P35527 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT9P35527 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
KRT9P35527 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT9P35527 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT9P35527 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
KRT9P35527 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT9P35527 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.97■■□□□ 1.11
KRT9P35527 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT9P35527 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT9P35527 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT9P35527 KRT8P36-201ENST00000489121 1440 ntBASIC21.97■■□□□ 1.11
KRT9P35527 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KRT9P35527 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
KRT9P35527 DPP3P2-201ENST00000416030 1696 ntBASIC21.96■■□□□ 1.11
KRT9P35527 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
KRT9P35527 KRT18P11-201ENST00000435214 1283 ntBASIC21.96■■□□□ 1.11
KRT9P35527 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.96■■□□□ 1.11
KRT9P35527 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT9P35527 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT9P35527 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
KRT9P35527 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT9P35527 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
KRT9P35527 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
KRT9P35527 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
KRT9P35527 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT9P35527 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT9P35527 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT9P35527 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
KRT9P35527 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT9P35527 AC091799.1-201ENST00000422823 811 ntBASIC21.95■■□□□ 1.1
KRT9P35527 AL162430.1-201ENST00000480705 870 ntBASIC21.95■■□□□ 1.1
KRT9P35527 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT9P35527 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT9P35527 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
KRT9P35527 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT9P35527 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
KRT9P35527 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
KRT9P35527 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KRT9P35527 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 AL691432.2-201ENST00000607222 2038 ntBASIC21.94■■□□□ 1.1
KRT9P35527 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KRT9P35527 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
KRT9P35527 AC016769.1-201ENST00000409132 1010 ntBASIC21.94■■□□□ 1.1
KRT9P35527 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
KRT9P35527 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.94■■□□□ 1.1
KRT9P35527 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT9P35527 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT9P35527 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.94■■□□□ 1.1
KRT9P35527 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
KRT9P35527 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
KRT9P35527 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.93■■□□□ 1.1
KRT9P35527 MIR935-201ENST00000401179 91 ntBASIC21.93■■□□□ 1.1
KRT9P35527 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KRT9P35527 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms