Protein–RNA interactions for Protein: P32497

NIP1, Eukaryotic translation initiation factor 3 subunit C, yeastyeast

Known RBP Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIP1P32497 ATG31YDR022C 591 nt1.41□□□□□ -2.18
NIP1P32497 YGL217CYGL217C 342 nt1.41□□□□□ -2.18
NIP1P32497 YNL058CYNL058C 951 nt1.41□□□□□ -2.18
NIP1P32497 TIM18YOR297C 579 nt1.41□□□□□ -2.18
NIP1P32497 SLX4YLR135W 2247 nt1.4□□□□□ -2.18
NIP1P32497 MSN5YDR335W 3675 nt1.4□□□□□ -2.19
NIP1P32497 UFD2YDL190C 2886 nt1.4□□□□□ -2.19
NIP1P32497 snR72snR72 98 nt1.4□□□□□ -2.19
NIP1P32497 YOR072W-AYOR072W-A 249 nt1.4□□□□□ -2.19
NIP1P32497 NUT2YPR168W 474 nt1.4□□□□□ -2.19
NIP1P32497 PIG1YLR273C 1947 nt1.4□□□□□ -2.19
NIP1P32497 SGO1YOR073W 1773 nt1.39□□□□□ -2.19
NIP1P32497 HMRA1YCR097W 381 nt1.39□□□□□ -2.19
NIP1P32497 EMC5YIL027C 426 nt1.39□□□□□ -2.19
NIP1P32497 YOR029WYOR029W 336 nt1.39□□□□□ -2.19
NIP1P32497 NOC3YLR002C 1992 nt1.39□□□□□ -2.19
NIP1P32497 YJR003CYJR003C 1560 nt1.38□□□□□ -2.19
NIP1P32497 YLL054CYLL054C 2532 nt1.38□□□□□ -2.19
NIP1P32497 MSH3YCR092C 3057 nt1.38□□□□□ -2.19
NIP1P32497 RSM22YKL155C 1887 nt1.38□□□□□ -2.19
NIP1P32497 snR56snR56 88 nt1.38□□□□□ -2.19
NIP1P32497 YDR182W-AYDR182W-A 204 nt1.38□□□□□ -2.19
NIP1P32497 tW(UCA)QtW(UCA)Q 74 nt1.38□□□□□ -2.19
NIP1P32497 YPR012WYPR012W 255 nt1.38□□□□□ -2.19
NIP1P32497 SCW11YGL028C 1629 nt1.37□□□□□ -2.19
NIP1P32497 ZIP2YGL249W 2115 nt1.37□□□□□ -2.19
NIP1P32497 YGR035CYGR035C 351 nt1.36□□□□□ -2.19
NIP1P32497 RRT15YLR162W-A 189 nt1.36□□□□□ -2.19
NIP1P32497 YMR175W-AYMR175W-A 195 nt1.36□□□□□ -2.19
NIP1P32497 BIL1YOR304C-A 231 nt1.36□□□□□ -2.19
NIP1P32497 AZF1YOR113W 2745 nt1.36□□□□□ -2.19
NIP1P32497 PBY1YBR094W 2262 nt1.35□□□□□ -2.19
NIP1P32497 YDR426CYDR426C 378 nt1.35□□□□□ -2.19
NIP1P32497 YHR175W-AYHR175W-A 150 nt1.35□□□□□ -2.19
NIP1P32497 RPL40BYKR094C 387 nt1.35□□□□□ -2.19
NIP1P32497 YGR130CYGR130C 2451 nt1.35□□□□□ -2.19
NIP1P32497 CDC36YDL165W 576 nt1.34□□□□□ -2.19
NIP1P32497 GIM4YEL003W 336 nt1.34□□□□□ -2.19
NIP1P32497 YMR242W-AYMR242W-A 90 nt1.34□□□□□ -2.19
NIP1P32497 YBR012CYBR012C 420 nt1.34□□□□□ -2.19
NIP1P32497 YOR199WYOR199W 330 nt1.34□□□□□ -2.19
NIP1P32497 snR14snR14 160 nt1.34□□□□□ -2.19
NIP1P32497 VPS54YDR027C 2670 nt1.34□□□□□ -2.2
NIP1P32497 NPC2YDL046W 522 nt1.33□□□□□ -2.2
NIP1P32497 YDL211CYDL211C 1119 nt1.33□□□□□ -2.2
NIP1P32497 YML007C-AYML007C-A 111 nt1.33□□□□□ -2.2
NIP1P32497 INP2YMR163C 2118 nt1.33□□□□□ -2.2
NIP1P32497 CSN9YDR179C 489 nt1.32□□□□□ -2.2
NIP1P32497 RPS20YHL015W 366 nt1.32□□□□□ -2.2
NIP1P32497 YAL063C-AYAL063C-A 291 nt1.32□□□□□ -2.2
NIP1P32497 HUG1YML058W-A 207 nt1.32□□□□□ -2.2
NIP1P32497 AIM44YPL158C 2277 nt1.32□□□□□ -2.2
NIP1P32497 YPR002C-AYPR002C-A 198 nt1.31□□□□□ -2.2
NIP1P32497 YPR016W-AYPR016W-A 261 nt1.31□□□□□ -2.2
NIP1P32497 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
NIP1P32497 APL2YKL135C 2181 nt1.31□□□□□ -2.2
NIP1P32497 CLU1YMR012W 3834 nt1.3□□□□□ -2.2
NIP1P32497 RAD9YDR217C 3930 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
NIP1P32497 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
NIP1P32497 STF2YGR008C 255 nt1.3□□□□□ -2.2
NIP1P32497 YPR197CYPR197C 564 nt1.3□□□□□ -2.2
NIP1P32497 MPT5YGL178W 2580 nt1.29□□□□□ -2.2
NIP1P32497 FIG4YNL325C 2640 nt1.29□□□□□ -2.2
NIP1P32497 PCC1YKR095W-A 267 nt1.29□□□□□ -2.2
NIP1P32497 YOR108C-AYOR108C-A 210 nt1.29□□□□□ -2.2
NIP1P32497 SEC3YER008C 4011 nt1.29□□□□□ -2.2
NIP1P32497 NUP188YML103C 4968 nt1.29□□□□□ -2.2
NIP1P32497 CDC25YLR310C 4770 nt1.28□□□□□ -2.2
NIP1P32497 YOR161W-BYOR161W-B 261 nt1.28□□□□□ -2.2
NIP1P32497 YPR063CYPR063C 423 nt1.28□□□□□ -2.2
NIP1P32497 RIM20YOR275C 1986 nt1.28□□□□□ -2.2
NIP1P32497 SLI15YBR156C 2097 nt1.27□□□□□ -2.21
NIP1P32497 YHL046W-AYHL046W-A 327 nt1.27□□□□□ -2.21
NIP1P32497 tR(ACG)Q2tR(ACG)Q2 74 nt1.27□□□□□ -2.21
NIP1P32497 YIL020C-AYIL020C-A 339 nt1.27□□□□□ -2.21
NIP1P32497 YOL160WYOL160W 342 nt1.27□□□□□ -2.21
NIP1P32497 ENV11YGR071C 2583 nt1.26□□□□□ -2.21
NIP1P32497 LCD1YDR499W 2244 nt1.26□□□□□ -2.21
NIP1P32497 YSY6YBR162W-A 198 nt1.26□□□□□ -2.21
NIP1P32497 PIP2YOR363C 2991 nt1.26□□□□□ -2.21
NIP1P32497 SPT21YMR179W 2277 nt1.26□□□□□ -2.21
NIP1P32497 MDS3YGL197W 4464 nt1.25□□□□□ -2.21
NIP1P32497 PKH2YOL100W 3246 nt1.25□□□□□ -2.21
NIP1P32497 COG4YPR105C 2586 nt1.25□□□□□ -2.21
NIP1P32497 YAR029WYAR029W 225 nt1.25□□□□□ -2.21
NIP1P32497 RPL38YLR325C 237 nt1.25□□□□□ -2.21
NIP1P32497 RPL33BYOR234C 324 nt1.25□□□□□ -2.21
NIP1P32497 YCS4YLR272C 3531 nt1.25□□□□□ -2.21
NIP1P32497 DOP1YDR141C 5097 nt1.24□□□□□ -2.21
NIP1P32497 RPL35AYDL191W 363 nt1.24□□□□□ -2.21
NIP1P32497 ATP6Q0085 780 nt1.24□□□□□ -2.21
NIP1P32497 YBL008W-AYBL008W-A 240 nt1.24□□□□□ -2.21
NIP1P32497 YPL038W-AYPL038W-A 192 nt1.24□□□□□ -2.21
NIP1P32497 SMC1YFL008W 3678 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 33.2 ms