Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.91■□□□□ 0.3
LMO1P25800 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.91■□□□□ 0.3
LMO1P25800 OR10C1-204ENST00000622521 1039 ntBASIC16.91■□□□□ 0.3
LMO1P25800 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 BX323043.1-201ENST00000641006 1765 ntBASIC16.91■□□□□ 0.3
LMO1P25800 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LMO1P25800 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
LMO1P25800 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LMO1P25800 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO1P25800 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LMO1P25800 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO1P25800 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.9■□□□□ 0.3
LMO1P25800 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LMO1P25800 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LMO1P25800 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.9■□□□□ 0.3
LMO1P25800 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
LMO1P25800 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LMO1P25800 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.89■□□□□ 0.3
LMO1P25800 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LMO1P25800 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.89■□□□□ 0.29
LMO1P25800 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.89■□□□□ 0.29
LMO1P25800 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 KRT18P68-201ENST00000392293 1000 ntBASIC16.89■□□□□ 0.29
LMO1P25800 AL512625.2-201ENST00000417533 625 ntBASIC16.89■□□□□ 0.29
LMO1P25800 CYP2T1P-201ENST00000432607 1285 ntBASIC16.89■□□□□ 0.29
LMO1P25800 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
LMO1P25800 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 AC008694.1-202ENST00000636953 945 ntBASIC16.89■□□□□ 0.29
LMO1P25800 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LMO1P25800 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LMO1P25800 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.88■□□□□ 0.29
LMO1P25800 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LMO1P25800 TCF3P1-201ENST00000423021 1937 ntBASIC16.88■□□□□ 0.29
LMO1P25800 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LMO1P25800 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LMO1P25800 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO1P25800 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.87■□□□□ 0.29
LMO1P25800 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.87■□□□□ 0.29
LMO1P25800 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LMO1P25800 CYP2T3P-201ENST00000601990 817 ntBASIC16.87■□□□□ 0.29
LMO1P25800 AC105020.6-201ENST00000621523 1217 ntBASIC16.87■□□□□ 0.29
LMO1P25800 AC092437.1-201ENST00000624794 1048 ntBASIC16.87■□□□□ 0.29
LMO1P25800 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LMO1P25800 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
LMO1P25800 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LMO1P25800 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LMO1P25800 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms