Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFEP18615 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFEP18615 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NELFEP18615 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFEP18615 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.8■□□□□ 0.76
NELFEP18615 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NELFEP18615 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NELFEP18615 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
NELFEP18615 MCRIP2P1-201ENST00000394346 511 ntBASIC19.8■□□□□ 0.76
NELFEP18615 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFEP18615 AL355472.2-201ENST00000422958 438 ntBASIC19.8■□□□□ 0.76
NELFEP18615 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.8■□□□□ 0.76
NELFEP18615 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.8■□□□□ 0.76
NELFEP18615 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFEP18615 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.8■□□□□ 0.76
NELFEP18615 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFEP18615 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NELFEP18615 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFEP18615 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFEP18615 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.79■□□□□ 0.76
NELFEP18615 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NELFEP18615 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NELFEP18615 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.79■□□□□ 0.76
NELFEP18615 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.79■□□□□ 0.76
NELFEP18615 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.79■□□□□ 0.76
NELFEP18615 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 KRT17P1-201ENST00000399211 1546 ntBASIC19.79■□□□□ 0.76
NELFEP18615 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFEP18615 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NELFEP18615 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFEP18615 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.78■□□□□ 0.76
NELFEP18615 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.78■□□□□ 0.76
NELFEP18615 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.78■□□□□ 0.76
NELFEP18615 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.78■□□□□ 0.76
NELFEP18615 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NELFEP18615 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFEP18615 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.77■□□□□ 0.76
NELFEP18615 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
NELFEP18615 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.77■□□□□ 0.76
NELFEP18615 POU5F1P3-201ENST00000428824 1078 ntBASIC19.77■□□□□ 0.76
NELFEP18615 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.77■□□□□ 0.76
NELFEP18615 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.77■□□□□ 0.76
NELFEP18615 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 AL020996.1-203ENST00000536896 2307 ntBASIC19.77■□□□□ 0.76
NELFEP18615 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.77■□□□□ 0.76
NELFEP18615 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFEP18615 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms