Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC2P18074 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC2P18074 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ERCC2P18074 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC2P18074 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.73■□□□□ 0.91
ERCC2P18074 MIR4758-201ENST00000577688 71 ntBASIC20.73■□□□□ 0.91
ERCC2P18074 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
ERCC2P18074 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.73■□□□□ 0.91
ERCC2P18074 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERCC2P18074 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ERCC2P18074 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.72■□□□□ 0.91
ERCC2P18074 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ERCC2P18074 HLA-L-209ENST00000420110 1011 ntBASIC20.72■□□□□ 0.91
ERCC2P18074 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.72■□□□□ 0.91
ERCC2P18074 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ERCC2P18074 AC091874.3-201ENST00000512672 1195 ntBASIC20.72■□□□□ 0.91
ERCC2P18074 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.72■□□□□ 0.91
ERCC2P18074 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.72■□□□□ 0.91
ERCC2P18074 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
ERCC2P18074 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ERCC2P18074 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.72■□□□□ 0.91
ERCC2P18074 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ERCC2P18074 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ERCC2P18074 AC112907.3-201ENST00000577781 2400 ntBASIC20.72■□□□□ 0.91
ERCC2P18074 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.71■□□□□ 0.91
ERCC2P18074 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ERCC2P18074 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 AC098934.4-201ENST00000564127 592 ntBASIC20.71■□□□□ 0.91
ERCC2P18074 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.71■□□□□ 0.91
ERCC2P18074 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ERCC2P18074 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
ERCC2P18074 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERCC2P18074 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.7■□□□□ 0.91
ERCC2P18074 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ERCC2P18074 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC2P18074 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
ERCC2P18074 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.7■□□□□ 0.9
ERCC2P18074 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC2P18074 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ERCC2P18074 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ERCC2P18074 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.7■□□□□ 0.9
ERCC2P18074 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
ERCC2P18074 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ERCC2P18074 ID1-201ENST00000376105 1233 ntBASIC20.69■□□□□ 0.9
ERCC2P18074 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ERCC2P18074 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.69■□□□□ 0.9
ERCC2P18074 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ERCC2P18074 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERCC2P18074 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ERCC2P18074 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC2P18074 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ERCC2P18074 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms