Protein–RNA interactions for Protein: P17883

SKI3, Superkiller protein 3, yeast

Known RBP Predictions only

Length 1,432 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	P17883	YBR051W	YBR051W	351 nt		-1	□□□□□ -2.57
SKI3	P17883	MCM10	YIL150C	1716 nt		-1.01	□□□□□ -2.57
SKI3	P17883	YDR344C	YDR344C	444 nt		-1.01	□□□□□ -2.57
SKI3	P17883	SMD2	YLR275W	333 nt		-1.02	□□□□□ -2.57
SKI3	P17883	RPS16A	YMR143W	432 nt		-1.03	□□□□□ -2.57
SKI3	P17883	MFA2	YNL145W	117 nt		-1.03	□□□□□ -2.57
SKI3	P17883	MUM2	YBR057C	1101 nt		-1.03	□□□□□ -2.57
SKI3	P17883	YBR223W-A	YBR223W-A	120 nt		-1.04	□□□□□ -2.58
SKI3	P17883	NIP1	YMR309C	2439 nt		-1.05	□□□□□ -2.58
SKI3	P17883	YDR182W-A	YDR182W-A	204 nt		-1.06	□□□□□ -2.58
SKI3	P17883	LEE1	YPL054W	906 nt		-1.06	□□□□□ -2.58
SKI3	P17883	snR36	snR36	182 nt		-1.06	□□□□□ -2.58
SKI3	P17883	YHL009W-B	YHL009W-B	5409 nt		-1.07	□□□□□ -2.58
SKI3	P17883	MMS2	YGL087C	414 nt		-1.08	□□□□□ -2.58
SKI3	P17883	snR33	snR33	183 nt		-1.08	□□□□□ -2.58
SKI3	P17883	RPS26A	YGL189C	360 nt		-1.09	□□□□□ -2.58
SKI3	P17883	CDC33	YOL139C	642 nt		-1.09	□□□□□ -2.58
SKI3	P17883	ARV1	YLR242C	966 nt		-1.1	□□□□□ -2.59
SKI3	P17883	VPS28	YPL065W	729 nt		-1.1	□□□□□ -2.59
SKI3	P17883	YNL211C	YNL211C	261 nt		-1.11	□□□□□ -2.59
SKI3	P17883	CSM4	YPL200W	471 nt		-1.11	□□□□□ -2.59
SKI3	P17883	NUP82	YJL061W	2142 nt		-1.11	□□□□□ -2.59
SKI3	P17883	YFR057W	YFR057W	456 nt		-1.14	□□□□□ -2.59
SKI3	P17883	YJR141W	YJR141W	1044 nt		-1.14	□□□□□ -2.59
SKI3	P17883	YPL044C	YPL044C	549 nt		-1.14	□□□□□ -2.59
SKI3	P17883	YDL068W	YDL068W	330 nt		-1.15	□□□□□ -2.59
SKI3	P17883	GPG1	YGL121C	381 nt		-1.15	□□□□□ -2.59
SKI3	P17883	OST4	YDL232W	111 nt		-1.16	□□□□□ -2.6
SKI3	P17883	ECM9	YKR004C	1134 nt		-1.17	□□□□□ -2.6
SKI3	P17883	COG6	YNL041C	2520 nt		-1.17	□□□□□ -2.6
SKI3	P17883	RPL29	YFR032C-A	180 nt		-1.19	□□□□□ -2.6
SKI3	P17883	GSP1	YLR293C	660 nt		-1.19	□□□□□ -2.6
SKI3	P17883	YKU70	YMR284W	1809 nt		-1.19	□□□□□ -2.6
SKI3	P17883	OLI1	Q0130	231 nt		-1.2	□□□□□ -2.6
SKI3	P17883	MAM33	YIL070C	801 nt		-1.2	□□□□□ -2.6
SKI3	P17883	AFB1	YLR040C	675 nt		-1.2	□□□□□ -2.6
SKI3	P17883	YNL146W	YNL146W	303 nt		-1.2	□□□□□ -2.6
SKI3	P17883	YOR020W-A	YOR020W-A	273 nt		-1.21	□□□□□ -2.6
SKI3	P17883	YDL152W	YDL152W	366 nt		-1.22	□□□□□ -2.6
SKI3	P17883	HTB2	YBL002W	396 nt		-1.22	□□□□□ -2.6
SKI3	P17883	DIE2	YGR227W	1578 nt		-1.22	□□□□□ -2.61
SKI3	P17883	NFU1	YKL040C	771 nt		-1.23	□□□□□ -2.61
SKI3	P17883	COY1	YKL179C	2040 nt		-1.23	□□□□□ -2.61
SKI3	P17883	YPL205C	YPL205C	345 nt		-1.24	□□□□□ -2.61
SKI3	P17883	YDR290W	YDR290W	330 nt		-1.25	□□□□□ -2.61
SKI3	P17883	GIM5	YML094W	492 nt		-1.25	□□□□□ -2.61
SKI3	P17883	YPR142C	YPR142C	564 nt		-1.25	□□□□□ -2.61
SKI3	P17883	PRP21	YJL203W	843 nt		-1.26	□□□□□ -2.61
SKI3	P17883	TFB6	YOR352W	1032 nt		-1.26	□□□□□ -2.61
SKI3	P17883	YAL067W-A	YAL067W-A	228 nt		-1.29	□□□□□ -2.62
SKI3	P17883	YER038W-A	YER038W-A	381 nt		-1.3	□□□□□ -2.62
SKI3	P17883	PFS1	YHR185C	714 nt		-1.3	□□□□□ -2.62
SKI3	P17883	YPR160W-A	YPR160W-A	81 nt		-1.3	□□□□□ -2.62
SKI3	P17883	MMS21	YEL019C	804 nt		-1.32	□□□□□ -2.62
SKI3	P17883	YMR158C-A	YMR158C-A	138 nt		-1.32	□□□□□ -2.62
SKI3	P17883	YPL185W	YPL185W	396 nt		-1.32	□□□□□ -2.62
SKI3	P17883	YPR096C	YPR096C	303 nt		-1.32	□□□□□ -2.62
SKI3	P17883	BI3	Q0115	1554 nt		-1.32	□□□□□ -2.62
SKI3	P17883	YLL032C	YLL032C	2478 nt		-1.32	□□□□□ -2.62
SKI3	P17883	ASE1	YOR058C	2658 nt		-1.32	□□□□□ -2.62
SKI3	P17883	HTB1	YDR224C	396 nt		-1.33	□□□□□ -2.62
SKI3	P17883	RMD6	YEL072W	696 nt		-1.33	□□□□□ -2.62
SKI3	P17883	TDA2	YER071C	381 nt		-1.35	□□□□□ -2.63
SKI3	P17883	YOR015W	YOR015W	360 nt		-1.35	□□□□□ -2.63
SKI3	P17883	RSM18	YER050C	417 nt		-1.36	□□□□□ -2.63
SKI3	P17883	YMR141W-A	YMR141W-A	225 nt		-1.37	□□□□□ -2.63
SKI3	P17883	PET20	YPL159C	762 nt		-1.37	□□□□□ -2.63
SKI3	P17883	YDR008C	YDR008C	351 nt		-1.38	□□□□□ -2.63
SKI3	P17883	MRPL31	YKL138C	396 nt		-1.4	□□□□□ -2.63
SKI3	P17883	YGL042C	YGL042C	306 nt		-1.4	□□□□□ -2.63
SKI3	P17883	YKL023C-A	YKL023C-A	228 nt		-1.4	□□□□□ -2.63
SKI3	P17883	YMR153C-A	YMR153C-A	336 nt		-1.4	□□□□□ -2.63
SKI3	P17883	YLR399W-A	YLR399W-A	105 nt		-1.42	□□□□□ -2.64
SKI3	P17883	ATP20	YPR020W	348 nt		-1.42	□□□□□ -2.64
SKI3	P17883	YJR079W	YJR079W	330 nt		-1.43	□□□□□ -2.64
SKI3	P17883	YJL120W	YJL120W	324 nt		-1.44	□□□□□ -2.64
SKI3	P17883	snR24	snR24	89 nt		-1.44	□□□□□ -2.64
SKI3	P17883	snR44	snR44	211 nt		-1.44	□□□□□ -2.64
SKI3	P17883	YGL204C	YGL204C	306 nt		-1.45	□□□□□ -2.64
SKI3	P17883	YMR158W-B	YMR158W-B	321 nt		-1.45	□□□□□ -2.64
SKI3	P17883	YJL086C	YJL086C	369 nt		-1.46	□□□□□ -2.64
SKI3	P17883	YOR345C	YOR345C	351 nt		-1.46	□□□□□ -2.64
SKI3	P17883	PAN3	YKL025C	2040 nt		-1.46	□□□□□ -2.64
SKI3	P17883	CMS1	YLR003C	876 nt		-1.47	□□□□□ -2.64
SKI3	P17883	BI4	Q0120	1917 nt		-1.47	□□□□□ -2.64
SKI3	P17883	YPL119C-A	YPL119C-A	264 nt		-1.48	□□□□□ -2.65
SKI3	P17883	MRPS8	YMR158W	468 nt		-1.49	□□□□□ -2.65
SKI3	P17883	YPR099C	YPR099C	357 nt		-1.49	□□□□□ -2.65
SKI3	P17883	snR79	snR79	84 nt		-1.5	□□□□□ -2.65
SKI3	P17883	EST1	YLR233C	2100 nt		-1.5	□□□□□ -2.65
SKI3	P17883	YBR064W	YBR064W	429 nt		-1.5	□□□□□ -2.65
SKI3	P17883	YER076W-A	YER076W-A	348 nt		-1.51	□□□□□ -2.65
SKI3	P17883	YLR146W-A	YLR146W-A	189 nt		-1.51	□□□□□ -2.65
SKI3	P17883	AI5_BETA	Q0075	1065 nt		-1.52	□□□□□ -2.65
SKI3	P17883	YBR121C-A	YBR121C-A	159 nt		-1.52	□□□□□ -2.65
SKI3	P17883	ZIP2	YGL249W	2115 nt		-1.53	□□□□□ -2.65
SKI3	P17883	THG1	YGR024C	714 nt		-1.53	□□□□□ -2.65
SKI3	P17883	YNL067W-B	YNL067W-B	141 nt		-1.53	□□□□□ -2.65
SKI3	P17883	PAA1	YDR071C	576 nt		-1.54	□□□□□ -2.66
SKI3	P17883	YFR012W-A	YFR012W-A	87 nt		-1.54	□□□□□ -2.66

Retrieved 100 of 7,029 protein–RNA pairs in 111.3 ms