Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PDGFRAP16234 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDGFRAP16234 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.13■□□□□ 0.97
PDGFRAP16234 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.13■□□□□ 0.97
PDGFRAP16234 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.13■□□□□ 0.97
PDGFRAP16234 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.12■□□□□ 0.97
PDGFRAP16234 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 AC069152.1-201ENST00000438030 544 ntBASIC21.12■□□□□ 0.97
PDGFRAP16234 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
PDGFRAP16234 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.12■□□□□ 0.97
PDGFRAP16234 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.12■□□□□ 0.97
PDGFRAP16234 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.12■□□□□ 0.97
PDGFRAP16234 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.12■□□□□ 0.97
PDGFRAP16234 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.12■□□□□ 0.97
PDGFRAP16234 AC099778.1-201ENST00000568593 1911 ntBASIC21.12■□□□□ 0.97
PDGFRAP16234 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDGFRAP16234 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.11■□□□□ 0.97
PDGFRAP16234 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDGFRAP16234 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.11■□□□□ 0.97
PDGFRAP16234 MIR4758-201ENST00000577688 71 ntBASIC21.11■□□□□ 0.97
PDGFRAP16234 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDGFRAP16234 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDGFRAP16234 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDGFRAP16234 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFRAP16234 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFRAP16234 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PDGFRAP16234 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFRAP16234 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDGFRAP16234 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.1■□□□□ 0.97
PDGFRAP16234 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.1■□□□□ 0.97
PDGFRAP16234 C2orf69P4-201ENST00000565394 541 ntBASIC21.1■□□□□ 0.97
PDGFRAP16234 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDGFRAP16234 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
PDGFRAP16234 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFRAP16234 AC133041.1-202ENST00000642053 222 ntBASIC21.1■□□□□ 0.97
PDGFRAP16234 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.1■□□□□ 0.97
PDGFRAP16234 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.1■□□□□ 0.97
PDGFRAP16234 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.09■□□□□ 0.97
PDGFRAP16234 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFRAP16234 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFRAP16234 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFRAP16234 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.09■□□□□ 0.97
PDGFRAP16234 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
PDGFRAP16234 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDGFRAP16234 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PDGFRAP16234 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDGFRAP16234 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
PDGFRAP16234 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.09■□□□□ 0.97
PDGFRAP16234 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDGFRAP16234 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.09■□□□□ 0.97
PDGFRAP16234 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
PDGFRAP16234 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.09■□□□□ 0.97
PDGFRAP16234 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.09■□□□□ 0.97
PDGFRAP16234 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.09■□□□□ 0.97
PDGFRAP16234 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PDGFRAP16234 AC112907.3-201ENST00000577781 2400 ntBASIC21.09■□□□□ 0.97
PDGFRAP16234 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFRAP16234 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFRAP16234 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFRAP16234 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFRAP16234 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDGFRAP16234 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
PDGFRAP16234 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.08■□□□□ 0.97
PDGFRAP16234 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDGFRAP16234 AC092118.2-201ENST00000613495 667 ntBASIC21.08■□□□□ 0.97
PDGFRAP16234 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.08■□□□□ 0.97
PDGFRAP16234 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDGFRAP16234 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms