Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.88■□□□□ 0.77
COL6A2P12110 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.88■□□□□ 0.77
COL6A2P12110 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
COL6A2P12110 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL6A2P12110 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL6A2P12110 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COL6A2P12110 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.87■□□□□ 0.77
COL6A2P12110 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.87■□□□□ 0.77
COL6A2P12110 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.87■□□□□ 0.77
COL6A2P12110 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A2P12110 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL6A2P12110 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.87■□□□□ 0.77
COL6A2P12110 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A2P12110 TERF1P5-201ENST00000477545 1207 ntBASIC19.87■□□□□ 0.77
COL6A2P12110 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.87■□□□□ 0.77
COL6A2P12110 KRT18P61-201ENST00000585825 1298 ntBASIC19.87■□□□□ 0.77
COL6A2P12110 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.87■□□□□ 0.77
COL6A2P12110 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COL6A2P12110 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL6A2P12110 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL6A2P12110 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.86■□□□□ 0.77
COL6A2P12110 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
COL6A2P12110 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
COL6A2P12110 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.86■□□□□ 0.77
COL6A2P12110 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL6A2P12110 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.86■□□□□ 0.77
COL6A2P12110 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL6A2P12110 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
COL6A2P12110 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
COL6A2P12110 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.85■□□□□ 0.77
COL6A2P12110 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
COL6A2P12110 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.85■□□□□ 0.77
COL6A2P12110 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 AC010536.3-201ENST00000620306 533 ntBASIC19.85■□□□□ 0.77
COL6A2P12110 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.85■□□□□ 0.77
COL6A2P12110 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.85■□□□□ 0.77
COL6A2P12110 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL6A2P12110 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
COL6A2P12110 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COL6A2P12110 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COL6A2P12110 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL6A2P12110 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL6A2P12110 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.84■□□□□ 0.77
COL6A2P12110 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A2P12110 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.84■□□□□ 0.77
COL6A2P12110 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.84■□□□□ 0.77
COL6A2P12110 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A2P12110 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A2P12110 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
COL6A2P12110 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL6A2P12110 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL6A2P12110 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL6A2P12110 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL6A2P12110 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL6A2P12110 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.83■□□□□ 0.77
COL6A2P12110 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.83■□□□□ 0.77
COL6A2P12110 ZNRF2P3-201ENST00000424200 374 ntBASIC19.83■□□□□ 0.77
COL6A2P12110 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL6A2P12110 AC007322.4-201ENST00000509611 723 ntBASIC19.83■□□□□ 0.77
COL6A2P12110 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL6A2P12110 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
COL6A2P12110 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL6A2P12110 AC116562.4-201ENST00000641316 2276 ntBASIC19.83■□□□□ 0.76
COL6A2P12110 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL6A2P12110 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL6A2P12110 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms