Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 PBI2YNL015W 228 nt0.92□□□□□ -2.26
SIR4P11978 snR14snR14 160 nt0.92□□□□□ -2.26
SIR4P11978 NOC3YLR002C 1992 nt0.92□□□□□ -2.26
SIR4P11978 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
SIR4P11978 HMLALPHA2YCL067C 633 nt0.91□□□□□ -2.26
SIR4P11978 MATALPHA2YCR039C 633 nt0.91□□□□□ -2.26
SIR4P11978 UBC7YMR022W 498 nt0.91□□□□□ -2.26
SIR4P11978 SWI6YLR182W 2412 nt0.9□□□□□ -2.27
SIR4P11978 AI5_ALPHAQ0070 1893 nt0.9□□□□□ -2.27
SIR4P11978 STB6YKL072W 2301 nt0.9□□□□□ -2.27
SIR4P11978 YDL158CYDL158C 309 nt0.9□□□□□ -2.27
SIR4P11978 YDR114CYDR114C 303 nt0.9□□□□□ -2.27
SIR4P11978 YLR146W-AYLR146W-A 189 nt0.9□□□□□ -2.27
SIR4P11978 YLR269CYLR269C 351 nt0.9□□□□□ -2.27
SIR4P11978 KAP120YPL125W 3099 nt0.9□□□□□ -2.27
SIR4P11978 SPO23YBR250W 1572 nt0.89□□□□□ -2.27
SIR4P11978 YCR001WYCR001W 315 nt0.89□□□□□ -2.27
SIR4P11978 YGR045CYGR045C 363 nt0.89□□□□□ -2.27
SIR4P11978 URM1YIL008W 300 nt0.89□□□□□ -2.27
SIR4P11978 LYS14YDR034C 2373 nt0.89□□□□□ -2.27
SIR4P11978 IFH1YLR223C 3258 nt0.88□□□□□ -2.27
SIR4P11978 PIG1YLR273C 1947 nt0.88□□□□□ -2.27
SIR4P11978 PXA2YKL188C 2562 nt0.88□□□□□ -2.27
SIR4P11978 YER087C-AYER087C-A 552 nt0.88□□□□□ -2.27
SIR4P11978 RPL16AYIL133C 600 nt0.88□□□□□ -2.27
SIR4P11978 YBR012CYBR012C 420 nt0.88□□□□□ -2.27
SIR4P11978 UTP8YGR128C 2142 nt0.88□□□□□ -2.27
SIR4P11978 BUL2YML111W 2763 nt0.87□□□□□ -2.27
SIR4P11978 YML108WYML108W 318 nt0.87□□□□□ -2.27
SIR4P11978 MPT5YGL178W 2580 nt0.86□□□□□ -2.27
SIR4P11978 YGL239CYGL239C 315 nt0.86□□□□□ -2.27
SIR4P11978 SDH2YLL041C 801 nt0.86□□□□□ -2.27
SIR4P11978 RPL32YBL092W 393 nt0.86□□□□□ -2.27
SIR4P11978 YPR153WYPR153W 423 nt0.86□□□□□ -2.27
SIR4P11978 NUT2YPR168W 474 nt0.86□□□□□ -2.27
SIR4P11978 TRS65YGR166W 1683 nt0.86□□□□□ -2.27
SIR4P11978 AI1Q0050 2505 nt0.86□□□□□ -2.27
SIR4P11978 YJR029WYJR029W 5268 nt0.85□□□□□ -2.27
SIR4P11978 YPR137C-BYPR137C-B 5268 nt0.85□□□□□ -2.27
SIR4P11978 YER076W-AYER076W-A 348 nt0.85□□□□□ -2.27
SIR4P11978 YAL016C-BYAL016C-B 186 nt0.85□□□□□ -2.27
SIR4P11978 CDC33YOL139C 642 nt0.85□□□□□ -2.27
SIR4P11978 SCW11YGL028C 1629 nt0.85□□□□□ -2.27
SIR4P11978 ALY2YJL084C 3141 nt0.85□□□□□ -2.27
SIR4P11978 SET3YKR029C 2256 nt0.85□□□□□ -2.27
SIR4P11978 AIM44YPL158C 2277 nt0.85□□□□□ -2.27
SIR4P11978 YER084W-AYER084W-A 513 nt0.84□□□□□ -2.27
SIR4P11978 YGR290WYGR290W 444 nt0.84□□□□□ -2.27
SIR4P11978 NFU1YKL040C 771 nt0.84□□□□□ -2.27
SIR4P11978 MRPL31YKL138C 396 nt0.84□□□□□ -2.27
SIR4P11978 YOR218CYOR218C 420 nt0.84□□□□□ -2.27
SIR4P11978 CDC39YCR093W 6327 nt0.84□□□□□ -2.27
SIR4P11978 SAS3YBL052C 2496 nt0.84□□□□□ -2.27
SIR4P11978 SEC1YDR164C 2175 nt0.84□□□□□ -2.28
SIR4P11978 YHR130CYHR130C 336 nt0.83□□□□□ -2.28
SIR4P11978 NBL1YHR199C-A 222 nt0.83□□□□□ -2.28
SIR4P11978 RUF22RUF22 515 nt0.83□□□□□ -2.28
SIR4P11978 YLL032CYLL032C 2478 nt0.83□□□□□ -2.28
SIR4P11978 RFX1YLR176C 2436 nt0.83□□□□□ -2.28
SIR4P11978 YIL066W-AYIL066W-A 444 nt0.83□□□□□ -2.28
SIR4P11978 AIM29YKR074W 468 nt0.83□□□□□ -2.28
SIR4P11978 YPL182CYPL182C 384 nt0.83□□□□□ -2.28
SIR4P11978 YDR182W-AYDR182W-A 204 nt0.82□□□□□ -2.28
SIR4P11978 RPS27AYKL156W 249 nt0.82□□□□□ -2.28
SIR4P11978 YBR076C-AYBR076C-A 267 nt0.82□□□□□ -2.28
SIR4P11978 YBR200W-AYBR200W-A 165 nt0.82□□□□□ -2.28
SIR4P11978 YDR269CYDR269C 324 nt0.81□□□□□ -2.28
SIR4P11978 CYC7YEL039C 342 nt0.81□□□□□ -2.28
SIR4P11978 YIL059CYIL059C 366 nt0.81□□□□□ -2.28
SIR4P11978 SLY1YDR189W 2001 nt0.81□□□□□ -2.28
SIR4P11978 ENV11YGR071C 2583 nt0.8□□□□□ -2.28
SIR4P11978 EFR3YMR212C 2349 nt0.8□□□□□ -2.28
SIR4P11978 FYV7YLR068W 456 nt0.8□□□□□ -2.28
SIR4P11978 UPS1YLR193C 528 nt0.8□□□□□ -2.28
SIR4P11978 YBL071CYBL071C 309 nt0.79□□□□□ -2.28
SIR4P11978 YNL122CYNL122C 348 nt0.79□□□□□ -2.28
SIR4P11978 YNL303WYNL303W 348 nt0.79□□□□□ -2.28
SIR4P11978 YBR221W-AYBR221W-A 105 nt0.79□□□□□ -2.28
SIR4P11978 STO1YMR125W 2586 nt0.78□□□□□ -2.28
SIR4P11978 BI2Q0110 1272 nt0.78□□□□□ -2.28
SIR4P11978 YHR125WYHR125W 306 nt0.78□□□□□ -2.28
SIR4P11978 ZEO1YOL109W 342 nt0.78□□□□□ -2.28
SIR4P11978 YOR199WYOR199W 330 nt0.78□□□□□ -2.28
SIR4P11978 snR189snR189 189 nt0.78□□□□□ -2.28
SIR4P11978 snR54snR54 86 nt0.78□□□□□ -2.28
SIR4P11978 LCD1YDR499W 2244 nt0.78□□□□□ -2.29
SIR4P11978 RIM20YOR275C 1986 nt0.77□□□□□ -2.29
SIR4P11978 IRC23YOR044W 474 nt0.77□□□□□ -2.29
SIR4P11978 AIM9YER080W 1884 nt0.77□□□□□ -2.29
SIR4P11978 PDE2YOR360C 1581 nt0.77□□□□□ -2.29
SIR4P11978 TIM13YGR181W 318 nt0.76□□□□□ -2.29
SIR4P11978 YLR287CYLR287C 1068 nt0.76□□□□□ -2.29
SIR4P11978 RRT1YBL048W 312 nt0.76□□□□□ -2.29
SIR4P11978 SLD3YGL113W 2007 nt0.76□□□□□ -2.29
SIR4P11978 MMS4YBR098W 2076 nt0.76□□□□□ -2.29
SIR4P11978 NPC2YDL046W 522 nt0.75□□□□□ -2.29
SIR4P11978 ZIP2YGL249W 2115 nt0.75□□□□□ -2.29
SIR4P11978 YOL013W-BYOL013W-B 291 nt0.75□□□□□ -2.29
SIR4P11978 YOR192C-CYOR192C-C 237 nt0.74□□□□□ -2.29
SIR4P11978 RPB10YOR210W 213 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms