Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DOAP06340 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DOAP06340 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 AL135905.2-201ENST00000584934 1404 ntBASIC23.8■■□□□ 1.4
HLA-DOAP06340 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DOAP06340 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.8■■□□□ 1.4
HLA-DOAP06340 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HLA-DOAP06340 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 AP001412.1-201ENST00000608405 714 ntBASIC23.79■■□□□ 1.4
HLA-DOAP06340 AL121906.2-201ENST00000621597 723 ntBASIC23.79■■□□□ 1.4
HLA-DOAP06340 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HLA-DOAP06340 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.79■■□□□ 1.4
HLA-DOAP06340 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 KRT8P20-201ENST00000423953 1409 ntBASIC23.78■■□□□ 1.4
HLA-DOAP06340 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 PTBP1P-201ENST00000554374 1601 ntBASIC23.78■■□□□ 1.4
HLA-DOAP06340 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 FP700111.2-201ENST00000619190 1892 ntBASIC23.78■■□□□ 1.4
HLA-DOAP06340 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.78■■□□□ 1.4
HLA-DOAP06340 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HLA-DOAP06340 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.78■■□□□ 1.4
HLA-DOAP06340 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 AC006128.1-201ENST00000624704 1661 ntBASIC23.77■■□□□ 1.4
HLA-DOAP06340 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 RARRES2P10-201ENST00000564312 460 ntBASIC23.77■■□□□ 1.4
HLA-DOAP06340 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 AL031963.3-201ENST00000606441 850 ntBASIC23.77■■□□□ 1.4
HLA-DOAP06340 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.77■■□□□ 1.4
HLA-DOAP06340 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HLA-DOAP06340 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.76■■□□□ 1.39
HLA-DOAP06340 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HLA-DOAP06340 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.75■■□□□ 1.39
HLA-DOAP06340 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.75■■□□□ 1.39
HLA-DOAP06340 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.75■■□□□ 1.39
HLA-DOAP06340 AC026310.3-201ENST00000625186 2373 ntBASIC23.75■■□□□ 1.39
HLA-DOAP06340 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
HLA-DOAP06340 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HLA-DOAP06340 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DOAP06340 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.74■■□□□ 1.39
HLA-DOAP06340 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DOAP06340 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HLA-DOAP06340 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms