Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PDGFBP01127 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.38■□□□□ 0.85
PDGFBP01127 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDGFBP01127 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDGFBP01127 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDGFBP01127 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.38■□□□□ 0.85
PDGFBP01127 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDGFBP01127 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
PDGFBP01127 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.37■□□□□ 0.85
PDGFBP01127 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.37■□□□□ 0.85
PDGFBP01127 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PDGFBP01127 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.37■□□□□ 0.85
PDGFBP01127 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.37■□□□□ 0.85
PDGFBP01127 AP005242.2-201ENST00000580065 1175 ntBASIC20.37■□□□□ 0.85
PDGFBP01127 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.37■□□□□ 0.85
PDGFBP01127 AL031985.4-201ENST00000642138 673 ntBASIC20.37■□□□□ 0.85
PDGFBP01127 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
PDGFBP01127 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDGFBP01127 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.37■□□□□ 0.85
PDGFBP01127 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PDGFBP01127 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDGFBP01127 RNF152P1-201ENST00000397754 604 ntBASIC20.36■□□□□ 0.85
PDGFBP01127 PCED1CP-201ENST00000419887 785 ntBASIC20.36■□□□□ 0.85
PDGFBP01127 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.36■□□□□ 0.85
PDGFBP01127 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.36■□□□□ 0.85
PDGFBP01127 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
PDGFBP01127 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.36■□□□□ 0.85
PDGFBP01127 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.36■□□□□ 0.85
PDGFBP01127 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDGFBP01127 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.35■□□□□ 0.85
PDGFBP01127 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.35■□□□□ 0.85
PDGFBP01127 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.35■□□□□ 0.85
PDGFBP01127 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PDGFBP01127 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 FSCN1P1-201ENST00000568912 1481 ntBASIC20.35■□□□□ 0.85
PDGFBP01127 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDGFBP01127 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDGFBP01127 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.34■□□□□ 0.85
PDGFBP01127 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.34■□□□□ 0.85
PDGFBP01127 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDGFBP01127 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.34■□□□□ 0.85
PDGFBP01127 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.34■□□□□ 0.85
PDGFBP01127 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 AC128688.1-201ENST00000487626 519 ntBASIC20.34■□□□□ 0.85
PDGFBP01127 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.34■□□□□ 0.85
PDGFBP01127 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PDGFBP01127 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDGFBP01127 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDGFBP01127 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.34■□□□□ 0.85
PDGFBP01127 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFBP01127 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.33■□□□□ 0.85
PDGFBP01127 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDGFBP01127 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.33■□□□□ 0.85
PDGFBP01127 B3GAT3P1-201ENST00000471720 806 ntBASIC20.33■□□□□ 0.85
PDGFBP01127 AC011506.1-201ENST00000474329 610 ntBASIC20.33■□□□□ 0.85
PDGFBP01127 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.33■□□□□ 0.85
PDGFBP01127 YBX1P2-201ENST00000489612 999 ntBASIC20.33■□□□□ 0.85
PDGFBP01127 FAM86EP-206ENST00000510506 987 ntBASIC20.33■□□□□ 0.85
PDGFBP01127 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFBP01127 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFBP01127 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFBP01127 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDGFBP01127 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.33■□□□□ 0.85
PDGFBP01127 CLEC4GP1-201ENST00000596555 870 ntBASIC20.33■□□□□ 0.85
PDGFBP01127 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDGFBP01127 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms