Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 AC099791.1-201ENST00000416440 715 ntBASIC18.93■□□□□ 0.62
CLPTM1O96005 BX842568.3-201ENST00000418104 571 ntBASIC18.93■□□□□ 0.62
CLPTM1O96005 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 AC233992.3-201ENST00000607491 485 ntBASIC18.93■□□□□ 0.62
CLPTM1O96005 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.93■□□□□ 0.62
CLPTM1O96005 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.93■□□□□ 0.62
CLPTM1O96005 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLPTM1O96005 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CLPTM1O96005 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPTM1O96005 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.92■□□□□ 0.62
CLPTM1O96005 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLPTM1O96005 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CLPTM1O96005 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPTM1O96005 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPTM1O96005 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CLPTM1O96005 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPTM1O96005 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPTM1O96005 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.91■□□□□ 0.62
CLPTM1O96005 AC027682.1-201ENST00000562846 899 ntBASIC18.91■□□□□ 0.62
CLPTM1O96005 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.91■□□□□ 0.62
CLPTM1O96005 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
CLPTM1O96005 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLPTM1O96005 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLPTM1O96005 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLPTM1O96005 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPTM1O96005 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLPTM1O96005 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLPTM1O96005 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 OR2I1P-207ENST00000453522 948 ntBASIC18.9■□□□□ 0.62
CLPTM1O96005 AC091305.1-201ENST00000479476 895 ntBASIC18.9■□□□□ 0.62
CLPTM1O96005 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.9■□□□□ 0.62
CLPTM1O96005 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.9■□□□□ 0.62
CLPTM1O96005 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
CLPTM1O96005 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLPTM1O96005 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLPTM1O96005 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
CLPTM1O96005 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPTM1O96005 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms