Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC073648.6-201ENST00000641589 218 ntBASIC21.21■□□□□ 0.99
RTN3O95197 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN3O95197 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
RTN3O95197 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTN3O95197 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RTN3O95197 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN3O95197 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN3O95197 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.2■□□□□ 0.98
RTN3O95197 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.2■□□□□ 0.98
RTN3O95197 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN3O95197 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN3O95197 AC008687.6-201ENST00000596318 630 ntBASIC21.2■□□□□ 0.98
RTN3O95197 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN3O95197 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN3O95197 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RTN3O95197 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN3O95197 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.2■□□□□ 0.98
RTN3O95197 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.19■□□□□ 0.98
RTN3O95197 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.19■□□□□ 0.98
RTN3O95197 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.19■□□□□ 0.98
RTN3O95197 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RTN3O95197 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.19■□□□□ 0.98
RTN3O95197 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.19■□□□□ 0.98
RTN3O95197 FP700111.2-201ENST00000619190 1892 ntBASIC21.19■□□□□ 0.98
RTN3O95197 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RTN3O95197 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN3O95197 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN3O95197 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RTN3O95197 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RTN3O95197 POM121L13P-201ENST00000422362 380 ntBASIC21.18■□□□□ 0.98
RTN3O95197 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.18■□□□□ 0.98
RTN3O95197 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.18■□□□□ 0.98
RTN3O95197 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RTN3O95197 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RTN3O95197 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN3O95197 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN3O95197 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTN3O95197 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN3O95197 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.17■□□□□ 0.98
RTN3O95197 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.17■□□□□ 0.98
RTN3O95197 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.17■□□□□ 0.98
RTN3O95197 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 AC006557.6-201ENST00000623071 864 ntBASIC21.17■□□□□ 0.98
RTN3O95197 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN3O95197 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN3O95197 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN3O95197 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTN3O95197 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN3O95197 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.17■□□□□ 0.98
RTN3O95197 AC005229.4-201ENST00000610085 2198 ntBASIC21.17■□□□□ 0.98
RTN3O95197 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTN3O95197 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN3O95197 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RTN3O95197 AC007225.1-201ENST00000566331 1836 ntBASIC21.16■□□□□ 0.98
RTN3O95197 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN3O95197 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.16■□□□□ 0.98
RTN3O95197 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN3O95197 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.16■□□□□ 0.98
RTN3O95197 AC120498.8-201ENST00000614275 531 ntBASIC21.16■□□□□ 0.98
RTN3O95197 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN3O95197 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RTN3O95197 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms