Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
NKX2-2O95096 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NKX2-2O95096 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NKX2-2O95096 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NKX2-2O95096 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.6■□□□□ 0.57
NKX2-2O95096 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NKX2-2O95096 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.6■□□□□ 0.57
NKX2-2O95096 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX2-2O95096 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX2-2O95096 AL031963.3-201ENST00000606441 850 ntBASIC18.6■□□□□ 0.57
NKX2-2O95096 AC092118.2-201ENST00000613495 667 ntBASIC18.6■□□□□ 0.57
NKX2-2O95096 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NKX2-2O95096 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX2-2O95096 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
NKX2-2O95096 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NKX2-2O95096 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 AC112907.3-201ENST00000577781 2400 ntBASIC18.59■□□□□ 0.57
NKX2-2O95096 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.59■□□□□ 0.57
NKX2-2O95096 AC090192.1-201ENST00000517740 490 ntBASIC18.59■□□□□ 0.57
NKX2-2O95096 AC023632.3-201ENST00000521633 145 ntBASIC18.59■□□□□ 0.57
NKX2-2O95096 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.59■□□□□ 0.57
NKX2-2O95096 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.59■□□□□ 0.57
NKX2-2O95096 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NKX2-2O95096 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NKX2-2O95096 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX2-2O95096 KRT8P20-201ENST00000423953 1409 ntBASIC18.58■□□□□ 0.57
NKX2-2O95096 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NKX2-2O95096 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX2-2O95096 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.57
NKX2-2O95096 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NKX2-2O95096 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX2-2O95096 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX2-2O95096 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NKX2-2O95096 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX2-2O95096 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX2-2O95096 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NKX2-2O95096 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX2-2O95096 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NKX2-2O95096 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.58■□□□□ 0.56
NKX2-2O95096 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NKX2-2O95096 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.58■□□□□ 0.56
NKX2-2O95096 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.58■□□□□ 0.56
NKX2-2O95096 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NKX2-2O95096 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.57■□□□□ 0.56
NKX2-2O95096 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.57■□□□□ 0.56
NKX2-2O95096 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NKX2-2O95096 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.57■□□□□ 0.56
NKX2-2O95096 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.57■□□□□ 0.56
NKX2-2O95096 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NKX2-2O95096 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.57■□□□□ 0.56
NKX2-2O95096 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.57■□□□□ 0.56
NKX2-2O95096 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.57■□□□□ 0.56
NKX2-2O95096 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NKX2-2O95096 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.57■□□□□ 0.56
NKX2-2O95096 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms