Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.56■□□□□ 0.4
UPK1BO75841 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UPK1BO75841 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.56■□□□□ 0.4
UPK1BO75841 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
UPK1BO75841 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
UPK1BO75841 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UPK1BO75841 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.56■□□□□ 0.4
UPK1BO75841 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UPK1BO75841 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
UPK1BO75841 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
UPK1BO75841 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.56■□□□□ 0.4
UPK1BO75841 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPK1BO75841 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UPK1BO75841 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
UPK1BO75841 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 AC010141.3-201ENST00000456659 717 ntBASIC17.55■□□□□ 0.4
UPK1BO75841 Z92544.1-202ENST00000571933 1220 ntBASIC17.55■□□□□ 0.4
UPK1BO75841 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UPK1BO75841 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.55■□□□□ 0.4
UPK1BO75841 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
UPK1BO75841 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 AC068880.1-201ENST00000507289 2297 ntBASIC17.54■□□□□ 0.4
UPK1BO75841 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK1BO75841 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPK1BO75841 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK1BO75841 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPK1BO75841 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UPK1BO75841 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
UPK1BO75841 AC138932.1-201ENST00000534164 6830 ntBASIC17.54■□□□□ 0.4
UPK1BO75841 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UPK1BO75841 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UPK1BO75841 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UPK1BO75841 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
UPK1BO75841 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK1BO75841 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPK1BO75841 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UPK1BO75841 GPX1-201ENST00000419349 1106 ntBASIC17.53■□□□□ 0.4
UPK1BO75841 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UPK1BO75841 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.53■□□□□ 0.4
UPK1BO75841 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.53■□□□□ 0.4
UPK1BO75841 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UPK1BO75841 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UPK1BO75841 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK1BO75841 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
UPK1BO75841 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK1BO75841 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPK1BO75841 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.52■□□□□ 0.4
UPK1BO75841 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms