Protein–RNA interactions for Protein: O60930

RNASEH1, Ribonuclease H1, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1O60930 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNASEH1O60930 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNASEH1O60930 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.6■□□□□ 0.89
RNASEH1O60930 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
RNASEH1O60930 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.6■□□□□ 0.89
RNASEH1O60930 AL158047.1-201ENST00000445918 881 ntBASIC20.6■□□□□ 0.89
RNASEH1O60930 AC093827.2-201ENST00000512654 315 ntBASIC20.6■□□□□ 0.89
RNASEH1O60930 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.6■□□□□ 0.89
RNASEH1O60930 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RNASEH1O60930 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNASEH1O60930 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RNASEH1O60930 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.59■□□□□ 0.89
RNASEH1O60930 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.59■□□□□ 0.89
RNASEH1O60930 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
RNASEH1O60930 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.59■□□□□ 0.89
RNASEH1O60930 GCSHP5-201ENST00000443090 522 ntBASIC20.59■□□□□ 0.89
RNASEH1O60930 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.59■□□□□ 0.89
RNASEH1O60930 AC098590.1-201ENST00000468126 897 ntBASIC20.59■□□□□ 0.89
RNASEH1O60930 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.59■□□□□ 0.89
RNASEH1O60930 SOX15-203ENST00000570788 1093 ntBASIC20.59■□□□□ 0.89
RNASEH1O60930 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.59■□□□□ 0.89
RNASEH1O60930 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
RNASEH1O60930 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.59■□□□□ 0.89
RNASEH1O60930 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 AC011484.1-201ENST00000377652 1995 ntBASIC20.59■□□□□ 0.89
RNASEH1O60930 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.59■□□□□ 0.89
RNASEH1O60930 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNASEH1O60930 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNASEH1O60930 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.58■□□□□ 0.89
RNASEH1O60930 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNASEH1O60930 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.58■□□□□ 0.89
RNASEH1O60930 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.58■□□□□ 0.89
RNASEH1O60930 AC008403.3-201ENST00000598924 454 ntBASIC20.58■□□□□ 0.89
RNASEH1O60930 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNASEH1O60930 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNASEH1O60930 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNASEH1O60930 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.57■□□□□ 0.88
RNASEH1O60930 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 RPS2P52-201ENST00000469610 820 ntBASIC20.57■□□□□ 0.88
RNASEH1O60930 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.57■□□□□ 0.88
RNASEH1O60930 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 Z98882.1-201ENST00000622160 2253 ntBASIC20.57■□□□□ 0.88
RNASEH1O60930 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
RNASEH1O60930 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.57■□□□□ 0.88
RNASEH1O60930 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNASEH1O60930 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.57■□□□□ 0.88
RNASEH1O60930 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.56■□□□□ 0.88
RNASEH1O60930 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
RNASEH1O60930 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.56■□□□□ 0.88
RNASEH1O60930 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNASEH1O60930 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNASEH1O60930 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNASEH1O60930 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms