Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.66■■□□□ 1.22
MSH4O15457 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MSH4O15457 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MSH4O15457 KRT8P17-201ENST00000453110 1448 ntBASIC22.65■■□□□ 1.22
MSH4O15457 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH4O15457 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH4O15457 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.65■■□□□ 1.22
MSH4O15457 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH4O15457 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
MSH4O15457 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.65■■□□□ 1.22
MSH4O15457 AL031963.3-201ENST00000606441 850 ntBASIC22.65■■□□□ 1.22
MSH4O15457 ITM2C-210ENST00000620962 501 ntBASIC22.65■■□□□ 1.22
MSH4O15457 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MSH4O15457 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.65■■□□□ 1.22
MSH4O15457 AC092667.1-201ENST00000434301 2586 ntBASIC22.65■■□□□ 1.22
MSH4O15457 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH4O15457 AL157384.1-201ENST00000445995 2473 ntBASIC22.65■■□□□ 1.22
MSH4O15457 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.65■■□□□ 1.22
MSH4O15457 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH4O15457 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MSH4O15457 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH4O15457 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.64■■□□□ 1.22
MSH4O15457 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
MSH4O15457 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH4O15457 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH4O15457 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH4O15457 AC128676.1-201ENST00000454392 318 ntBASIC22.64■■□□□ 1.21
MSH4O15457 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.64■■□□□ 1.21
MSH4O15457 AC120498.8-201ENST00000614275 531 ntBASIC22.64■■□□□ 1.21
MSH4O15457 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MSH4O15457 KRT8P20-201ENST00000423953 1409 ntBASIC22.64■■□□□ 1.21
MSH4O15457 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MSH4O15457 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSH4O15457 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
MSH4O15457 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
MSH4O15457 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.63■■□□□ 1.21
MSH4O15457 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.63■■□□□ 1.21
MSH4O15457 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSH4O15457 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSH4O15457 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.63■■□□□ 1.21
MSH4O15457 AC233263.1-201ENST00000578059 224 ntBASIC22.63■■□□□ 1.21
MSH4O15457 TMEM191A-211ENST00000637163 1067 ntBASIC22.63■■□□□ 1.21
MSH4O15457 AC073648.6-201ENST00000641589 218 ntBASIC22.63■■□□□ 1.21
MSH4O15457 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MSH4O15457 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.63■■□□□ 1.21
MSH4O15457 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
MSH4O15457 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
MSH4O15457 GABARAPL3-202ENST00000624044 1851 ntBASIC22.62■■□□□ 1.21
MSH4O15457 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.62■■□□□ 1.21
MSH4O15457 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
MSH4O15457 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MSH4O15457 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.62■■□□□ 1.21
MSH4O15457 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.62■■□□□ 1.21
MSH4O15457 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 PRORSD1P-201ENST00000295112 541 ntBASIC22.62■■□□□ 1.21
MSH4O15457 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 HLA-G-202ENST00000376815 851 ntBASIC22.62■■□□□ 1.21
MSH4O15457 HLA-G-203ENST00000376818 1127 ntBASIC22.62■■□□□ 1.21
MSH4O15457 POM121L13P-201ENST00000422362 380 ntBASIC22.62■■□□□ 1.21
MSH4O15457 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.62■■□□□ 1.21
MSH4O15457 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.62■■□□□ 1.21
MSH4O15457 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.62■■□□□ 1.21
MSH4O15457 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 AL512408.1-201ENST00000569378 2000 ntBASIC22.62■■□□□ 1.21
MSH4O15457 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MSH4O15457 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
MSH4O15457 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
MSH4O15457 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.61■■□□□ 1.21
MSH4O15457 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 KRT18P29-201ENST00000397031 1267 ntBASIC22.61■■□□□ 1.21
MSH4O15457 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.61■■□□□ 1.21
MSH4O15457 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.61■■□□□ 1.21
MSH4O15457 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.61■■□□□ 1.21
MSH4O15457 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH4O15457 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms