Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
UPK2O00526 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
UPK2O00526 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK2O00526 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UPK2O00526 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK2O00526 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UPK2O00526 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK2O00526 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK2O00526 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK2O00526 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
UPK2O00526 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.14■□□□□ 0.17
UPK2O00526 KRT18P11-201ENST00000435214 1283 ntBASIC16.14■□□□□ 0.17
UPK2O00526 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.14■□□□□ 0.17
UPK2O00526 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
UPK2O00526 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.14■□□□□ 0.17
UPK2O00526 AL162412.1-201ENST00000567129 965 ntBASIC16.14■□□□□ 0.17
UPK2O00526 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.14■□□□□ 0.17
UPK2O00526 TMEM179-206ENST00000616017 1645 ntBASIC16.14■□□□□ 0.17
UPK2O00526 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK2O00526 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.14■□□□□ 0.17
UPK2O00526 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
UPK2O00526 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UPK2O00526 AC007952.6-201ENST00000573168 2673 ntBASIC16.13■□□□□ 0.17
UPK2O00526 AC003957.1-201ENST00000625108 2673 ntBASIC16.13■□□□□ 0.17
UPK2O00526 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.13■□□□□ 0.17
UPK2O00526 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 AC007322.4-201ENST00000509611 723 ntBASIC16.13■□□□□ 0.17
UPK2O00526 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.13■□□□□ 0.17
UPK2O00526 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.13■□□□□ 0.17
UPK2O00526 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 AC013268.1-206ENST00000638368 961 ntBASIC16.13■□□□□ 0.17
UPK2O00526 AC112229.1-201ENST00000639295 961 ntBASIC16.13■□□□□ 0.17
UPK2O00526 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UPK2O00526 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UPK2O00526 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UPK2O00526 AL691432.2-201ENST00000607222 2038 ntBASIC16.12■□□□□ 0.17
UPK2O00526 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UPK2O00526 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
UPK2O00526 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
UPK2O00526 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.12■□□□□ 0.17
UPK2O00526 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK2O00526 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK2O00526 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK2O00526 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UPK2O00526 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
UPK2O00526 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK2O00526 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK2O00526 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
UPK2O00526 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
UPK2O00526 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK2O00526 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK2O00526 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK2O00526 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms