Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 AL512408.1-201ENST00000569378 2000 ntBASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
YJEFN3A6XGL0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 AP003097.1-201ENST00000530657 1135 ntBASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
YJEFN3A6XGL0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
YJEFN3A6XGL0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.02■□□□□ 0.95
YJEFN3A6XGL0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 AC026366.1-201ENST00000488803 879 ntBASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 KRT8P17-201ENST00000453110 1448 ntBASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.01■□□□□ 0.95
YJEFN3A6XGL0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 AL390719.1-204ENST00000412397 1219 ntBASIC21■□□□□ 0.95
YJEFN3A6XGL0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 AL031963.3-201ENST00000606441 850 ntBASIC21■□□□□ 0.95
YJEFN3A6XGL0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21■□□□□ 0.95
YJEFN3A6XGL0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21■□□□□ 0.95
YJEFN3A6XGL0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 KRT8P20-201ENST00000423953 1409 ntBASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
YJEFN3A6XGL0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms