Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL391422.3-201ENST00000603791 2761 ntBASIC19.15■□□□□ 0.66
LRIT2A6NDA9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 AC069152.1-201ENST00000438030 544 ntBASIC19.15■□□□□ 0.66
LRIT2A6NDA9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 AC097658.1-201ENST00000475555 843 ntBASIC19.15■□□□□ 0.66
LRIT2A6NDA9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 AC133041.1-202ENST00000642053 222 ntBASIC19.15■□□□□ 0.66
LRIT2A6NDA9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LRIT2A6NDA9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
LRIT2A6NDA9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRIT2A6NDA9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LRIT2A6NDA9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 AC073130.3-201ENST00000624389 2278 ntBASIC19.14■□□□□ 0.65
LRIT2A6NDA9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRIT2A6NDA9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 AL355802.2-201ENST00000402069 882 ntBASIC19.13■□□□□ 0.65
LRIT2A6NDA9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 AC023632.3-201ENST00000521633 145 ntBASIC19.13■□□□□ 0.65
LRIT2A6NDA9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 KRT8P17-201ENST00000453110 1448 ntBASIC19.13■□□□□ 0.65
LRIT2A6NDA9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRIT2A6NDA9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 AL031963.3-201ENST00000606441 850 ntBASIC19.12■□□□□ 0.65
LRIT2A6NDA9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRIT2A6NDA9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRIT2A6NDA9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms