Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 C1QBPP2-201ENST00000528754 825 ntBASIC29.91■■■□□ 2.38
HFM1A2PYH4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 AC142381.4-202ENST00000563973 229 ntBASIC29.91■■■□□ 2.38
HFM1A2PYH4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
HFM1A2PYH4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
HFM1A2PYH4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC29.9■■■□□ 2.38
HFM1A2PYH4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC29.9■■■□□ 2.38
HFM1A2PYH4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC29.9■■■□□ 2.38
HFM1A2PYH4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC29.9■■■□□ 2.38
HFM1A2PYH4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC29.9■■■□□ 2.38
HFM1A2PYH4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 AL121829.2-201ENST00000620908 328 ntBASIC29.9■■■□□ 2.38
HFM1A2PYH4 AL121906.2-201ENST00000621597 723 ntBASIC29.9■■■□□ 2.38
HFM1A2PYH4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 AC020907.5-201ENST00000624372 1936 ntBASIC29.9■■■□□ 2.38
HFM1A2PYH4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.9■■■□□ 2.38
HFM1A2PYH4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
HFM1A2PYH4 HLA-G-202ENST00000376815 851 ntBASIC29.89■■■□□ 2.38
HFM1A2PYH4 HLA-G-203ENST00000376818 1127 ntBASIC29.89■■■□□ 2.38
HFM1A2PYH4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC29.89■■■□□ 2.38
HFM1A2PYH4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC29.89■■■□□ 2.38
HFM1A2PYH4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
HFM1A2PYH4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.37
HFM1A2PYH4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
HFM1A2PYH4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC29.89■■■□□ 2.37
HFM1A2PYH4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC29.89■■■□□ 2.37
HFM1A2PYH4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 AL158047.1-201ENST00000445918 881 ntBASIC29.88■■■□□ 2.37
HFM1A2PYH4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
HFM1A2PYH4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
HFM1A2PYH4 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.88■■■□□ 2.37
HFM1A2PYH4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HFM1A2PYH4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HFM1A2PYH4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
HFM1A2PYH4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC29.87■■■□□ 2.37
HFM1A2PYH4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HFM1A2PYH4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HFM1A2PYH4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
HFM1A2PYH4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
HFM1A2PYH4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
HFM1A2PYH4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 AC239809.2-201ENST00000415381 517 ntBASIC29.86■■■□□ 2.37
HFM1A2PYH4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 USP36-216ENST00000589424 970 ntTSL 5 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
HFM1A2PYH4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 SMG8-203ENST00000578922 2178 ntBASIC29.85■■■□□ 2.37
HFM1A2PYH4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
HFM1A2PYH4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
HFM1A2PYH4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
HFM1A2PYH4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms