Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.54□□□□□ -0.08
IGHV4-28A0A0C4DH34 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 AL121603.2-201ENST00000557373 2117 ntBASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC128676.1-201ENST00000454392 318 ntBASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV4-28A0A0C4DH34 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
IGHV4-28A0A0C4DH34 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC005829.2-201ENST00000571422 1056 ntBASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC008403.3-201ENST00000598924 454 ntBASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC006557.6-201ENST00000623071 864 ntBASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IGHV4-28A0A0C4DH34 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC007225.1-201ENST00000566331 1836 ntBASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 PRORSD1P-201ENST00000295112 541 ntBASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 AC073648.6-201ENST00000641589 218 ntBASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IGHV4-28A0A0C4DH34 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 AIRN-201ENST00000601203 4374 ntBASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
IGHV4-28A0A0C4DH34 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms