Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 AP005212.1-201ENST00000581547 1997 ntBASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV41A0A0B4J266 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV41A0A0B4J266 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV41A0A0B4J266 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 GABARAPL3-202ENST00000624044 1851 ntBASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 HLA-B-256ENST00000639848 1089 ntBASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV41A0A0B4J266 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 HLA-G-202ENST00000376815 851 ntBASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 HLA-G-203ENST00000376818 1127 ntBASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AL390719.1-204ENST00000412397 1219 ntBASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AC092368.3-202ENST00000574180 1591 ntBASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AC060766.5-201ENST00000590539 871 ntBASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV41A0A0B4J266 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV41A0A0B4J266 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms