Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 LSM12P1-201ENST00000411836 588 ntBASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 AC083906.2-201ENST00000511578 360 ntBASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 AC020907.5-201ENST00000624372 1936 ntBASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV2A0A0B4J234 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 FEM1AP1-201ENST00000431297 1995 ntBASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 AP005212.1-201ENST00000581547 1997 ntBASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV2A0A0B4J234 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 AC092118.2-201ENST00000613495 667 ntBASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms