Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 AC093484.2-201ENST00000580996 2166 ntBASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV18A0A075B6X5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV18A0A075B6X5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 AL356441.2-201ENST00000443009 864 ntBASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 AC245052.3-201ENST00000450182 901 ntBASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 AC131281.2-201ENST00000520478 145 ntBASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 DPP3P2-201ENST00000416030 1696 ntBASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV18A0A075B6X5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 TSPY26P-201ENST00000476365 1326 ntBASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRAV18A0A075B6X5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 UNC93B3-201ENST00000308076 687 ntBASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV18A0A075B6X5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms