Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC019181.1-201ENST00000417151 310 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC013467.1-201ENST00000430717 1041 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ACTBP12-201ENST00000435871 418 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 CLUHP5-201ENST00000438421 774 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 OR7E102P-201ENST00000448855 1015 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 RN7SL333P-201ENST00000476398 297 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC027338.2-201ENST00000504382 526 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 KLF3P1-201ENST00000521506 1022 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AP003168.1-201ENST00000530091 307 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 SDHCP4-201ENST00000532834 510 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC018737.1-201ENST00000603900 204 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AL121917.2-201ENST00000605044 390 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 uc_338.33-201ENST00000614988 170 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AP000720.1-201ENST00000625091 483 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC073488.11-201ENST00000633298 754 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 SMG1P1-202ENST00000309865 4223 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 AL512662.1-201ENST00000624850 2251 ntBASIC7.2□□□□□ -1.26
SNX18Q96RF0 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNX18Q96RF0 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 FO393411.1-201ENST00000325612 420 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC096664.1-201ENST00000393996 778 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 U3.34-201ENST00000408198 212 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC006457.1-201ENST00000420733 392 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC098828.1-201ENST00000436164 440 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC005840.2-201ENST00000447193 355 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 RN7SL368P-201ENST00000473384 277 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 IGLVI-68-201ENST00000519525 345 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AP006587.2-201ENST00000530696 493 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 BCAP31P2-201ENST00000563143 399 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 BCAP31P1-201ENST00000565437 385 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC005014.3-201ENST00000605985 190 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC010542.5-201ENST00000612427 382 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL162574.2-201ENST00000614618 657 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL356095.2-201ENST00000624025 457 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 SAMMSON-214ENST00000641395 1264 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms