Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXG1P55316 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.78□□□□□ -1.32
FOXG1P55316 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.78□□□□□ -1.32
FOXG1P55316 AL080317.3-201ENST00000607434 4315 ntBASIC6.77□□□□□ -1.32
FOXG1P55316 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
FOXG1P55316 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.32
FOXG1P55316 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXG1P55316 FGG-204ENST00000405164 1539 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 AP003972.1-201ENST00000625192 5446 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 AC092952.1-201ENST00000397646 1209 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 IFNA12P-201ENST00000413147 571 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC017104.2-201ENST00000417000 321 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC092042.2-201ENST00000417304 331 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 RSL24D1P2-201ENST00000445584 366 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 SETP4-201ENST00000455717 868 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 RPS18P13-201ENST00000461260 454 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 RWDD4P1-201ENST00000488019 565 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 RN7SL445P-201ENST00000495609 293 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 AP005597.1-201ENST00000534192 802 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXG1P55316 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 CHCHD3P2-201ENST00000550751 639 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 AC244090.2-201ENST00000567614 792 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXG1P55316 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
FOXG1P55316 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.77□□□□□ -1.33
FOXG1P55316 AC129492.5-201ENST00000603489 315 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 AC005014.3-201ENST00000605985 190 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 AC116003.3-201ENST00000612669 541 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 IGKV1OR1-1-201ENST00000613775 347 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 AC016582.3-206ENST00000636547 207 ntBASIC6.77□□□□□ -1.33
FOXG1P55316 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXG1P55316 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.77□□□□□ -1.33
FOXG1P55316 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
FOXG1P55316 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
FOXG1P55316 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
FOXG1P55316 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
FOXG1P55316 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXG1P55316 AC130464.1-201ENST00000416201 1500 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXG1P55316 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
FOXG1P55316 TATDN2P1-201ENST00000443767 2331 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
FOXG1P55316 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXG1P55316 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 U3.1-201ENST00000362500 215 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
FOXG1P55316 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXG1P55316 MTND2P9-201ENST00000422293 931 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.76□□□□□ -1.33
FOXG1P55316 RPS21P1-201ENST00000434479 247 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.76□□□□□ -1.33
FOXG1P55316 PHBP4-201ENST00000437447 837 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
FOXG1P55316 FDPSP8-201ENST00000438304 1089 ntBASIC6.76□□□□□ -1.33
FOXG1P55316 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
FOXG1P55316 UBE2V2P4-201ENST00000447495 259 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms