Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL513548.2-201ENST00000602994 1207 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 AL137190.1-201ENST00000603288 282 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.42□□□□□ -1.06
UBE4BO95155 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.42□□□□□ -1.06
UBE4BO95155 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 AL353608.4-201ENST00000624487 1188 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 AC073488.8-201ENST00000631952 757 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 AC027313.1-201ENST00000509159 1666 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
UBE4BO95155 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 RPL4P2-201ENST00000447259 1282 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 RPL10P6-201ENST00000457497 318 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 TDGF1P6-201ENST00000463873 448 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 RN7SL508P-201ENST00000464472 303 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 RN7SL635P-201ENST00000492123 296 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 RN7SL519P-201ENST00000497925 288 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.41□□□□□ -1.06
UBE4BO95155 AC100823.2-201ENST00000518337 699 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.41□□□□□ -1.06
UBE4BO95155 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC8.41□□□□□ -1.06
UBE4BO95155 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.41□□□□□ -1.06
UBE4BO95155 AC090415.1-201ENST00000581877 847 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 SNRPCP20-201ENST00000588011 210 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC8.41□□□□□ -1.06
UBE4BO95155 AC005518.2-201ENST00000603254 282 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 FAM74A6-203ENST00000615956 481 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.41□□□□□ -1.06
UBE4BO95155 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
UBE4BO95155 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.41□□□□□ -1.06
UBE4BO95155 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
UBE4BO95155 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 THAP12P7-201ENST00000520248 2290 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 AL512662.1-201ENST00000624850 2251 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 RPL4P4-201ENST00000422486 1284 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 ANKRD54P1-201ENST00000433115 471 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 RPS13P2-201ENST00000437890 455 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.4□□□□□ -1.06
UBE4BO95155 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 AC007000.1-201ENST00000453064 794 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 CREM-224ENST00000468236 582 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 RN7SL124P-201ENST00000498656 285 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 AC114300.1-201ENST00000502347 280 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC8.4□□□□□ -1.06
UBE4BO95155 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.4□□□□□ -1.06
UBE4BO95155 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
UBE4BO95155 AL021918.1-201ENST00000603933 236 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.4□□□□□ -1.06
UBE4BO95155 AL390882.1-201ENST00000618821 594 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms