Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC009283.1-201ENST00000615852 645 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AC005899.6-201ENST00000620729 297 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AC006453.3-201ENST00000635891 377 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 EEF1A1P5-201ENST00000436459 1389 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC9.7□□□□□ -0.86
COL15A1P39059 AC125232.1-201ENST00000452554 1408 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC9.7□□□□□ -0.86
COL15A1P39059 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
COL15A1P39059 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC9.69□□□□□ -0.86
COL15A1P39059 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
COL15A1P39059 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 AL022163.1-201ENST00000430261 1569 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC9.69□□□□□ -0.86
COL15A1P39059 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC012493.1-201ENST00000453252 760 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 EIF3LP2-201ENST00000457262 807 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 WBP1LP1-201ENST00000460451 896 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AC008040.4-201ENST00000494834 768 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC130366.1-201ENST00000526505 1192 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC087257.2-201ENST00000538759 928 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC9.69□□□□□ -0.86
COL15A1P39059 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 AL022238.3-201ENST00000609279 443 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AL161931.1-201ENST00000612768 246 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AC007671.1-201ENST00000616957 830 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC9.69□□□□□ -0.86
COL15A1P39059 AC005609.2-201ENST00000623320 592 ntBASIC9.69□□□□□ -0.86
COL15A1P39059 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
COL15A1P39059 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
COL15A1P39059 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC9.69□□□□□ -0.86
COL15A1P39059 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.69□□□□□ -0.86
COL15A1P39059 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 NF1P2-201ENST00000556855 2505 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 RN7SKP63-201ENST00000363187 301 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 RN7SKP131-201ENST00000410698 301 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC9.68□□□□□ -0.86
COL15A1P39059 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 E2F6P1-201ENST00000428850 745 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 AC018892.2-201ENST00000457656 693 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 RN7SL688P-201ENST00000471754 275 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC9.68□□□□□ -0.86
COL15A1P39059 SDHCP4-201ENST00000532834 510 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 RN7SL680P-201ENST00000620379 299 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC9.68□□□□□ -0.86
COL15A1P39059 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
COL15A1P39059 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 LINC00294-201ENST00000631190 3306 ntBASIC9.68□□□□□ -0.86
COL15A1P39059 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.68□□□□□ -0.86
COL15A1P39059 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC9.68□□□□□ -0.86
COL15A1P39059 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
COL15A1P39059 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms