Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 RN7SKP37-201ENST00000364494 296 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 MTND2P11-201ENST00000423638 648 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 EIF3IP1-201ENST00000433048 967 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 NUTF2P5-201ENST00000475013 379 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC068042.1-201ENST00000482222 1148 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 GAPDHP44-201ENST00000513513 1007 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AL109628.2-201ENST00000554037 201 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AL136141.1-201ENST00000605780 369 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC092953.2-201ENST00000608000 699 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 LYG2-206ENST00000626374 650 ntTSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC116631.1-202ENST00000640984 683 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 PSMC1P3-201ENST00000453822 1318 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AF228730.7-203ENST00000641436 1804 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC123769.2-201ENST00000624332 5984 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 GTF2IP1-202ENST00000614592 2047 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 SNORA73A-201ENST00000364938 206 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 COX6A1P3-201ENST00000404167 293 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC019070.1-201ENST00000415008 1024 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 RPL3P4-201ENST00000417615 423 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AL513318.1-201ENST00000437925 991 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC083906.4-201ENST00000514634 987 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 RN7SKP197-201ENST00000517077 297 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 PSEN1-223ENST00000557511 1230 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 ULK4P3-201ENST00000563895 440 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC093826.2-201ENST00000579042 108 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 RN7SL14P-201ENST00000579715 298 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNX18Q96RF0 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC000068.3-201ENST00000607934 427 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 MIR6762-201ENST00000613340 86 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AL391262.2-201ENST00000622466 494 ntBASIC7.22□□□□□ -1.25
SNX18Q96RF0 AC130456.6-201ENST00000623745 765 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms