Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.46□□□□□ -1.06
UBE4BO95155 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
UBE4BO95155 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 SLC9B1P3-201ENST00000452667 1334 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 AC016831.3-201ENST00000446451 1723 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 BCRP8-201ENST00000412037 255 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 RPL35P8-201ENST00000433284 337 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 AC245047.5-201ENST00000437312 556 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AC090954.1-201ENST00000445502 361 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 PTMAP1-205ENST00000455552 325 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC8.45□□□□□ -1.06
UBE4BO95155 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 RN7SL664P-201ENST00000584239 305 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.45□□□□□ -1.06
UBE4BO95155 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AL096855.2-201ENST00000605785 369 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AL590560.2-201ENST00000608430 732 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AL451054.1-201ENST00000621770 772 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 AC090099.1-204ENST00000623626 849 ntBASIC8.45□□□□□ -1.06
UBE4BO95155 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.45□□□□□ -1.06
UBE4BO95155 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.45□□□□□ -1.06
UBE4BO95155 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
UBE4BO95155 CREM-218ENST00000460270 1416 ntTSL 2 BASIC8.45□□□□□ -1.06
UBE4BO95155 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
UBE4BO95155 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
UBE4BO95155 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 RBM5-AS1-201ENST00000630404 1386 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 RPL5P8-201ENST00000396820 815 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 GAS8-AS1-201ENST00000408886 435 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AL022100.1-202ENST00000421214 548 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 AL137074.1-201ENST00000442640 465 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 RN7SL19P-201ENST00000462522 306 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AC117392.1-201ENST00000487061 596 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 SCARNA20.1-201ENST00000516009 138 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 UBE2CP1-201ENST00000557130 554 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.44□□□□□ -1.06
UBE4BO95155 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.44□□□□□ -1.06
UBE4BO95155 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.44□□□□□ -1.06
UBE4BO95155 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 AL451085.1-201ENST00000604546 690 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AL109918.2-201ENST00000605188 279 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AL136141.1-201ENST00000605780 369 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AC016394.1-201ENST00000608444 833 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
UBE4BO95155 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms